| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1883 |
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| Symbol | |
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| ID | 3934334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1872773 |
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| End bp | 1874626 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904237 |
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| Product | putative peptidyl-prolyl cis-trans isomerse D |
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| Protein accession | YP_509825 |
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| Protein GI | 89054374 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.284878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAT CTGCCGCGAA AAAAGTCTCC AACGTCTTTG TCTGGATCCT GATGGGCCTG
TTATTCGTCG CACTCGCGGG CTTCGGCATC GGCTCTTTCA GCGGCGGCGC GAGCCAGGTC
GGCTCCGTCG GTGATGTGGA GATCACGGCG GATGACTACT TTCGCGCGCT CAACAACGAG
ATCAACGCCC AAAGCGCCGA TGAACGCCGC GCCGTCCCAT TTGCCGAAAT CCGCGCGCGC
GGGATCGACG CACAGATCCT TGCAGGCCTG ACCGCACGCG CCGCATTGAG CCATGAGGCC
GGCGCCATGG GCATCTCCGT GGGCGATGCG GAGGTCGCGG CCCAGATTGC GCAGGTCCAG
GCCTTCCAGA ACACGTCCGG CAATTTTGAC CGCAACACGT ATGAATTTGT CCTTCAACAA
CAGGGCGCTA CCCCGCGGGA GTTTGAAGAA GACACGCGCG AAGATGTGGC GCGCGCGCTG
TTGCAGACCG CCGTCATCGG CGGCCTTACC CCCAATGAGA TCTTTGCCGA AACTATCACC
GCTTACCAAT CCGAGACCCG CGATTTCACC CGGCTGGAAG TGCGCGAAGG CGATCTGACC
GTCCCTATCG CGGAGCCCAC GGACGCGGAG CTTGCCGCCT ATTACGACGA ATTCCCCGAG
CGGTTCACCC GCCCCGAAGC GCGCCGCATC ACCTACGCCT GGATCATCCC GTCGGCGATC
ATGGACGACG TGGAGATTGA TGAGGACGCC CTGCGGGAGC TGTATGATGA CCGCATCGAC
GAATATGTTC AGCCCGAGCG GCGGCTTCTG GAACGGCTGG TGTTCAACTC TGACGCAGAG
GTCGACGCGG CCCTTGCAGC GATTGAGGCA GAGGAGACGG ATTTCGACAC GCTTGTCGCG
GACCGCGACC TGACCCTTGA GGATGTGGAT CTGGGCGAAA TTGCCGCCGA TGATCTGAGC
GATGCCGCCG CCGCCATCAT TTTCGCCGAT GAGGATAGCG AGCTTCTGGG GCCCGTCCCC
TCCCCCCTCG GCCCCGCGCT CTTCCGGGTG AACGCGGTCC TGCAATCGTC GGAAGTGCCG
TTCGAGGAGG CCCGCGATGA CCTGAGCGCG GAACTGGCGC AGGAAGGCGC ACGCCGTCAG
ATCGATGACA TGCGTGAAGG GATTGACGAT CTGCTGGCCT CCGGCGCGAC GTTGGAAGAG
CTGAGCGATG GCACCGTCAT GACCCTGGGA ACACTGGATT ATACGCCTGC CTCCGAGGAG
GGCATCGCCG CCTACGACAA TTTCCGCGAT GCGGCTGTGT CGGTGCAGGA CAGTGATTTC
CCTGAACTGC TGGAGCTGAG CGATGGGGGC CTTTTTGCCC TGCGCCTGGA CGAGGTCGTA
CCGCCGACCC TGCCGCCGCT GGACGAGATC GAAGCCGAGG TGGCCGAGGC CTGGCAAGCA
ACAGCGTTGC GCGATGCGGT GGCCGAACGG GCCTCGCAAC TGGTCGCGCA ACTGGCGCAA
GGGGCCACGC TGGAGGATCT GGGCGACACG GCCGAGGAAC GCCTGATCCG CCGCCAGGAC
CTGCTGCCCG ATCTGCCCGC CACCACCGTG GCCCAGGTGT TCCAGCTGGA GGGTACGGGC
GATGTCGTGA TGATCCCCGG GGCCGATGCC GCCCATATCG TGCGGCTCGA TACGATCAAC
TCCGGCGTGC GCGATGCGCC TGACACGTCG GTGATCCTGT CGATCATGAA CCAGAGCATC
GCCCAATCCA TGGCCGTCGA TATCTTTGAG GCCTATGGTC AGGCGCTGCA GGCGAATGCG
GGCATCACCA CCAACCAAGG CGTGATCAAC GCGGTTCACG CGTCGTTTCC TTAG
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| Protein sequence | MAKSAAKKVS NVFVWILMGL LFVALAGFGI GSFSGGASQV GSVGDVEITA DDYFRALNNE
INAQSADERR AVPFAEIRAR GIDAQILAGL TARAALSHEA GAMGISVGDA EVAAQIAQVQ
AFQNTSGNFD RNTYEFVLQQ QGATPREFEE DTREDVARAL LQTAVIGGLT PNEIFAETIT
AYQSETRDFT RLEVREGDLT VPIAEPTDAE LAAYYDEFPE RFTRPEARRI TYAWIIPSAI
MDDVEIDEDA LRELYDDRID EYVQPERRLL ERLVFNSDAE VDAALAAIEA EETDFDTLVA
DRDLTLEDVD LGEIAADDLS DAAAAIIFAD EDSELLGPVP SPLGPALFRV NAVLQSSEVP
FEEARDDLSA ELAQEGARRQ IDDMREGIDD LLASGATLEE LSDGTVMTLG TLDYTPASEE
GIAAYDNFRD AAVSVQDSDF PELLELSDGG LFALRLDEVV PPTLPPLDEI EAEVAEAWQA
TALRDAVAER ASQLVAQLAQ GATLEDLGDT AEERLIRRQD LLPDLPATTV AQVFQLEGTG
DVVMIPGADA AHIVRLDTIN SGVRDAPDTS VILSIMNQSI AQSMAVDIFE AYGQALQANA
GITTNQGVIN AVHASFP
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