Gene Jann_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1880 
Symbol 
ID3934331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1868474 
End bp1869061 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content60% 
IMG OID637904234 
Productanthranilate synthase, component II 
Protein accessionYP_509822 
Protein GI89054371 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0512] Anthranilate/para-aminobenzoate synthases component II 
TIGRFAM ID[TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.573908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0815956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTCC TGATCGATAA TTACGACAGT TTCACCTACA ACCTTGTCCA TTATCTGGGG 
GAGCTTGGGG CCGACATCCG CGTGGTCCGC AACGACAAGA TCAGCGTGCA GGATGCGATG
GCATCGGGCG CATTGGGGAT CGTGCTGAGC CCTGGGCCAG GCTATCCGGC GGATGCGGGG
ATTTGCCTTC CCCTGACCAA GGCCTGTGCG GGCGCGGGGA TGCCATTGAT GGGCGTGTGT
CTGGGTCATC AGACGATTGG AGAGGCGTTT GGCGGCAAGA TCGTGCAGCA TGCCGAGATC
GTGCATGGCA AGCTCGGGGC GATGAAACAC GAGGGTCAGG GCGTCTTTGC AGGCCTGCCG
TCCCCCCTGA ACGCAACACG CTACCACTCC CTCGTAGTGG ACCGGGCAAC CCTGCCCGAT
GCGCTGGACA TCACAGCCGA GTTAGACGAC GGCACCATCA TGGGCCTGCG CCACAAGGAC
TTGCCGATCG AGGGCGTGCA ATTCCACCCC GAAAGCATCC GGTCCGAGCA TGGCCACGCG
ATGTTAAGAA ATTTCCTGAA TAAGACCGAC GAGAAAGTGC CCGCATGA
 
Protein sequence
MLLLIDNYDS FTYNLVHYLG ELGADIRVVR NDKISVQDAM ASGALGIVLS PGPGYPADAG 
ICLPLTKACA GAGMPLMGVC LGHQTIGEAF GGKIVQHAEI VHGKLGAMKH EGQGVFAGLP
SPLNATRYHS LVVDRATLPD ALDITAELDD GTIMGLRHKD LPIEGVQFHP ESIRSEHGHA
MLRNFLNKTD EKVPA