| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1873 |
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| Symbol | |
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| ID | 3934324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1861653 |
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| End bp | 1863206 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637904227 |
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| Product | deoxyribodipyrimidine photo-lyase type I |
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| Protein accession | YP_509815 |
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| Protein GI | 89054364 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0543845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATG TTCTGGTTTT GTTCAAGCGT GACCTGCGCG TGCAGGACAA CCCGGCGCTG
GCCCTGGCCG CGTCGCGGGA CGGGGCGGCG CTGCCCGTCT TTGTGGCCGA GCCTGAGGCC
TGGGCGCAGC CCGACGCCTC CGCCCGGCAG TGGCGGTTTG TGGCCGAAAG CCTGGAGGGG
CTGCGCGCCG ATCTGGCCGC ACTTGGCGCG CCCCTGATCG TGCGGCGCGG CGATATGATG
GCGGTGCTTG GTGGGTTGTG CGCGACCCAT GACGTCGGCG AAATCATCAG CATCGAGGAA
ACCGGCAACC TGTGGAGCTA TGGCCGCGAC CGTCGCCTCG CGGCCTGGGC ACGGGGCGCG
GGGGTGATCT GGACGGAGGT GCCGCAATTG GGCGTGCAGC GCCGCTTGGT GAACCGCGAT
GGATGGGCGC GGGACCGTCA GGCGGTGATG CGGCAGGCGC AGGTGCCTGT GCCGGAGGGT
CTGCGCGGCG TGTCCGAGGA GCCGGGCAGC ATCCCAGACG CCCGCGATCT GGCGCTGGCG
TTCGATCCAT GCCCGGGACG GCAGGCGGGG GGCCGTGACG GGGGCCTTGC GACGCTCGCC
TCCTTCCTGA CGGCGCGCGG GCAAGAGTAC CGCCGCGCCA TGTCCTCGCC GCTGGACGGG
GCGGCGGCCT GCTCGCGCCT CTCGCCGCAT TTGGCCTGGG GGACATTGTC CTCCCGTGAG
GTGCTGCACG GCATGGCGGC CCGGCGCGCC GAGGTGAAGG GCACACGCGA CGGCTGGCTC
GGCTCCCTGC GCAGTTTTGA AGCCCGCGTG GCCTGGCGCG ATCACTTCAT GCAAAAGCTG
GAGGATCAGC CCGCGATGGA GATCCGCTGC CTGCACTCCG CCTACGAGGA CCTGCGCCCG
AACGTGCCTG ACGCCACGCG CCTCAGCGCT TGGGAAAAGG GCGAAACCGG CATTCCCTTC
GTGGATGCCT GCATGCGGTC GCTGATTGCC ACGGGATGGA TCAACTTCCG CATGCGCGCG
ATGCTGGCGG CCGTGGCCTC CTACCATCTG TGGCTGGATT GGCGCAGGAC TGGCCCGCAT
CTGGCGCGGA TGTTTACGGA TTATGAGCCC GGCATCCACT GGCCGCAGAT GCAAATGCAA
GCGGGCACGA CGGGGATGAA CACGATCCGC ATCTACAACC CGGTCAAGCA GGGCCTCGAC
CATGACCCGA CCGGCACGTT CACCCGCACA TGGTGCCCGG AATTGCGGGA GGTGCCCGAT
GCCTGCCTGC AAACGCCCTG GGCCTGGGCC GAGACGGGGT CACCCGCGGC TCGCCGTCTG
GGGCGTCGCT ATCCGGCCCC GATTGTCGAT GTGACGCAAG CCGCCCGTGC GGCCCGGGAC
CGGGCATTTG CCGTGCGCCG CGGCGATGCC TTTCACCGGG AGGCGTCGGA GATTGTCACC
AAACACGCCA GCCGCAAAGA TAGCGGGGCC GGGCGTCATT TCGTGAACGA TAGAGAGAGA
ACGCGCCGAT CAAAGGCGCA GACCCCCTCG GCTCAGCTGG ACCTCGGGCT ATAG
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| Protein sequence | MKNVLVLFKR DLRVQDNPAL ALAASRDGAA LPVFVAEPEA WAQPDASARQ WRFVAESLEG
LRADLAALGA PLIVRRGDMM AVLGGLCATH DVGEIISIEE TGNLWSYGRD RRLAAWARGA
GVIWTEVPQL GVQRRLVNRD GWARDRQAVM RQAQVPVPEG LRGVSEEPGS IPDARDLALA
FDPCPGRQAG GRDGGLATLA SFLTARGQEY RRAMSSPLDG AAACSRLSPH LAWGTLSSRE
VLHGMAARRA EVKGTRDGWL GSLRSFEARV AWRDHFMQKL EDQPAMEIRC LHSAYEDLRP
NVPDATRLSA WEKGETGIPF VDACMRSLIA TGWINFRMRA MLAAVASYHL WLDWRRTGPH
LARMFTDYEP GIHWPQMQMQ AGTTGMNTIR IYNPVKQGLD HDPTGTFTRT WCPELREVPD
ACLQTPWAWA ETGSPAARRL GRRYPAPIVD VTQAARAARD RAFAVRRGDA FHREASEIVT
KHASRKDSGA GRHFVNDRER TRRSKAQTPS AQLDLGL
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