| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1871 |
|---|
| Symbol | |
|---|
| ID | 3934322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1857993 |
|---|
| End bp | 1858784 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637904225 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_509813 |
|---|
| Protein GI | 89054362 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3503] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0219449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGCAA AACCCACTAC ACCTGTATCC ATGACCCAGA CCCTCCCCGA TGACACCGCC
CCCTACGCCC GCCCGGGCGC GCGTATCCCC GCGCTCGACA TCGCGCGCAC CGGCGCGCTT
GCGGCCATGG TGCTGTTTCA CTTCGTCTTT GATCTGGAGA TGTTCGGCCA TGTGCCGCGC
GGGACTGCCA CGACAGGCAT CTGGCGGGCG CTGGCCGTGG CGACGGCGGG ATCGTTCCTG
TGTCTCGCGG GTATGGGCCT GTGGCTGGCC CATGGCACCG GTATCCGCTG GCCCGCGTTC
TGGCGGCGGT TTGCCAAGGT GGCGGGGGCG GCGGGTCTGG TCAGCATCGG CACCTATATC
GCTTTCCCCC ATGCCTTCGT CTTCTTCGGC ATCCTCCATT CCATCGCGCT TTGCAGCCTG
TTGGGCCTTC TTGCGCTGCG GTTGCCCGTT CTGGCCATCG CGGGCCTCGC CGTGGTCGTC
TTCTACGTGC CGGAGTTTGC CCGCTCGTCC GCATTCGACG CGCCCTATTG GTGGTGGACG
GGCCTTCAGA CCCGACCTCT CAGCACGGTG GATTATGAAC CGATCTTTCC CTGGTTCGCG
CCGTTTCTCG CCGGGGTGGC GGTGTCCAAA TTTGCCACAC AGATGGGCCT GTGGGCGCGC
CTCTCAACGC CCGCCCCGTC CCGGGTCATA CATCTTGCGG GGCTGCCGGG CCGCCATTCG
CTGCTGATCT ACCTGATCCA TCAACCGATC CTGATCGGCC TTGTCTGGGG CGTCACGCAA
CTGATGCGCT GA
|
|---|
| Protein sequence | MPAKPTTPVS MTQTLPDDTA PYARPGARIP ALDIARTGAL AAMVLFHFVF DLEMFGHVPR
GTATTGIWRA LAVATAGSFL CLAGMGLWLA HGTGIRWPAF WRRFAKVAGA AGLVSIGTYI
AFPHAFVFFG ILHSIALCSL LGLLALRLPV LAIAGLAVVV FYVPEFARSS AFDAPYWWWT
GLQTRPLSTV DYEPIFPWFA PFLAGVAVSK FATQMGLWAR LSTPAPSRVI HLAGLPGRHS
LLIYLIHQPI LIGLVWGVTQ LMR
|
|---|
| |