| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1860 |
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| Symbol | |
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| ID | 3934311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1847563 |
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| End bp | 1848708 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904214 |
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| Product | HI0933-like protein |
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| Protein accession | YP_509802 |
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| Protein GI | 89054351 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2081] Predicted flavoproteins |
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| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.479593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0118098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCACC ACGTCCAAAC CCTCATTCTC GGCGCCGGGG CCGCTGGCCT CATGTGTGCC
GCCCATGCCG GGCCGGACAC GCTGGTGGTT GACCACGCTA AGGCCCCGGG CGAGAAGATC
CGCATCTCCG GTGGCGGGCG CTGCAACTTC ACCAATATGT ATGCGGAACC GGCGAATTTC
TTAAGCGAAA ACATCCACTT CGCCAAGTCC GCCCTATCGC GCTACACGCA ATGGGACTTC
CTCGATCTCG TCCAGAAACA CGACATTCCC TACCATGAGA AAACCCTGGG CCAGCTCTTC
TGCGACCGCT CCGCCAAGGA CATCATCGCC ATGCTTCTGG CGGAAATGGG CCCGGCCAAG
CTTTGGCTCC AGACCGACAT CGGTGAGGTG GCCCATCGCG ACGGCCTCTT CCACGTCACG
CTGACGCGAG AGGGCAAACG TCACGGCGTC ACCGCCCGCA ATCTCGTGCT CGCCACGGGC
GGGAAATCCA TCCCCAAAAT GGGCGCCACC GGCCTGGCCT ACCGCATCGC AGAGCAATTC
GGCCACCGCA TCACCGACAC CCGCCCTGCC CTTGTCCCAT TGACGTTTGA GGGCGAGGTG
AAGGCGCAAT TCGCCGCTTT GTCCGGCACT TCGGTGCCCG CGCGCGTGGC CTGCAACGGC
ACCCGTTTTG ACGAGGGGAT GCTGTTCACG CATCGGGGGC TGTCGGGCCC GTCGATCCTG
CAAATCTCAT CCTATTGGGC GGAGGGCGAT ACGTTGTCGC TGCATCTTCT GCCCGAAGCG
GACCTGTTTG AGGTGCTTCG TGCCCGTCGC ACGCAGGCTG GCGGCAAGGC GCTCACCAGC
GTTTTGGCCG AGCTTTTGCC GAAGAAACTC GTGGCCCATC TGGCGGAGGT TTGGGGCCTG
ACCGGCAACC TTGCCGATCA ATCCGATATC GCCTTGCGCG CCCTGACCGA CCAGCTCACC
GCCTGGCCCG TTACGCCGAC CTCGTCGGAG GGCTACCGCA CCGCTGAAGT CACGCTCGGC
GGCATCGCGA CTGAAGGGAT GTCCTCAAAA ACCATGGAAA GCCAGCATGT TAAGGGCCTC
TACGTGATCG GAGAGGCGGT GGACGTGACC GGCTGGCTGG GGGGATACAA CTTCCAATGG
GCGTAG
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| Protein sequence | MVHHVQTLIL GAGAAGLMCA AHAGPDTLVV DHAKAPGEKI RISGGGRCNF TNMYAEPANF
LSENIHFAKS ALSRYTQWDF LDLVQKHDIP YHEKTLGQLF CDRSAKDIIA MLLAEMGPAK
LWLQTDIGEV AHRDGLFHVT LTREGKRHGV TARNLVLATG GKSIPKMGAT GLAYRIAEQF
GHRITDTRPA LVPLTFEGEV KAQFAALSGT SVPARVACNG TRFDEGMLFT HRGLSGPSIL
QISSYWAEGD TLSLHLLPEA DLFEVLRARR TQAGGKALTS VLAELLPKKL VAHLAEVWGL
TGNLADQSDI ALRALTDQLT AWPVTPTSSE GYRTAEVTLG GIATEGMSSK TMESQHVKGL
YVIGEAVDVT GWLGGYNFQW A
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