| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1854 |
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| Symbol | |
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| ID | 3934305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1841576 |
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| End bp | 1842769 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904208 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_509796 |
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| Protein GI | 89054345 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.58476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00243487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAGATA CCGCTCGCAA ACACTGGTCC AAACGCACCC GCGCGGTGCA TGCAGGCTCC
CGCCGCAGCC AATACGGAGA GCTGTCGGAA GCGATGTTCC TGACGCAGGG CTTCGTCTAT
CCCACCGCCG AGGATGCGGA GGCCCGTTTC ATCAAATCCG GCGAGGATGA GTATATCTAC
GCCCGCTACG GCAACCCGAC CGTGGCGATG TTTGAAGACC GCATCGCGTC GCTGGAAGGG
GCGGAGGCGG GCTTTGCCAC GGCCTCGGGC ATGGCGGCAG TCAATGGCGC GCTCACGTCG
ATGCTGCGGG CGGGCGATCA CGTGGTGTCG TCCCGCGCGC TTTTTGGGTC GTGTCATTAT
GTCTTGGACG AGATCCTGAC CCGGTTTGGC GTGGACGTCA CCTTCGTGGA CGGCCCCGAT
CTGGACGCGT GGCGCGCCGC CATGCGCCCG GACACCAAGG CGGTGTTCTT CGAATCGCTC
TCCAATCCCA CGCTGGAGAT GATCGACATT CGCGCCGTGG CTGAGATCGC CCATGCCGTC
GGTGCGACGG TCATCTGCGA TAACGTCTTT GCCACCCCCA CGTTCAGCGA TGCCATCGCC
CAAGGCGTCG ATGTCGTTGT CTATTCCACC ACCAAACACA TTGACGGGCA GGGGCGCTGT
CTGGGGGGCG TGATCCTGGG GACGGAAGAA TTTATCCGCA AAACGGTGGA GCCTTACCTC
AAGCACACCG GCGGCGCGAT GTCGCCCTTC AACGCGTGGG TGATGCTGAA GGGGCTGGAG
ACGATGGACC TGCGGGTGCG GGCGCAAACT GCGTCGGCTC AGGCGATTGC GGAGGCGCTG
CAAGATGCGC CCGGTGTGGC GCGGGTGATT TATCCCGGCC TCGCCGACCA CCCCCAGCAC
GCGCTCTGCC AGGCGCAGAT GGGCGAGGGG GGGACCGTCG TTGCGGTGGA GGCCACGGAT
GGACAGGCGG GGGCGTTCCG CGCGCTCAAT GCGCTGGAGA TCTTCACGAT TTCCAACAAT
CTTGGCGATG CGAAGTCCAT TGCCACCCAT CCCACGACGA CCACCCACCA GCGCCTGACC
GATGAGCAGC GCGCGGAGAT GGGGATCACG CCGGGCCTGA TCCGTCTGTC GATCGGCTTG
GAAGACACCG ATGATCTGGT CGCAGACCTG CTTGATGCGT TGGAACTGGC ATGA
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| Protein sequence | MKDTARKHWS KRTRAVHAGS RRSQYGELSE AMFLTQGFVY PTAEDAEARF IKSGEDEYIY
ARYGNPTVAM FEDRIASLEG AEAGFATASG MAAVNGALTS MLRAGDHVVS SRALFGSCHY
VLDEILTRFG VDVTFVDGPD LDAWRAAMRP DTKAVFFESL SNPTLEMIDI RAVAEIAHAV
GATVICDNVF ATPTFSDAIA QGVDVVVYST TKHIDGQGRC LGGVILGTEE FIRKTVEPYL
KHTGGAMSPF NAWVMLKGLE TMDLRVRAQT ASAQAIAEAL QDAPGVARVI YPGLADHPQH
ALCQAQMGEG GTVVAVEATD GQAGAFRALN ALEIFTISNN LGDAKSIATH PTTTTHQRLT
DEQRAEMGIT PGLIRLSIGL EDTDDLVADL LDALELA
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