Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1853 |
Symbol | |
ID | 3934304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1840144 |
End bp | 1841079 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637904207 |
Product | hypothetical protein |
Protein accession | YP_509795 |
Protein GI | 89054344 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.266553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0134195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGC GCTTCGGGGG CCAACACAGC CCCACAGGTC AAAGAGACGG CGATACCCCG CGCGAGATGG TGAGCCATCA GAAGATGGAG ATTGCCCCCT TCAAGGGTCG CAAACCCATG CGGCACGGGG CCAAGCTGAA CATCCTGTTC ATCCTGCCAC TGCTGACGAT CTTCTCCGTG CTGTTCAACT CCGGCGTGCT GGAAATGGCC ACGGATCTGG CGGGCGGCGC GGTTCTGCTG TTGTCGGCCT GGCTGACGCG CGACGGCGTG CGGGCAGAAG ATGCCTTCAA CGAGCGCAAG GTCGCCCGCA AGCCCGCGAT CCCGCGCAAG ATTTTTGGCG CTGTCGGCAC CGGGTTGGGC GTGGCGCTGC TGATTTTGGG CGGGTCGAAT TATGGCGTGC AATCGCTGGT ATCCGCCAAT GTTGTGGGCA TCCTGGCCGC GGCCCTTCAC CTGTTCTCCT TCGGGCTCGA CCCCCTGAAA AACAAGGGGA TGGAGGGGAT GGACACCTTC ACTTCGGACC GCGTGGCGCG CAAGATCGAT GAGGCCGAGG CGCTTCTGGC AGAGCAAAAA GACGCCATCG CGAGGGTGCG CGACCCGCAG TTGGAGGCGC GCGTGGAGCG GTTCCAGGAC GTGGCGCGCG GCCTGTTCCG CCAGGTGGAA GAAGATCCCC GGGATCTGAA TGCGGCCCGC CGTTATCTGG GCGTCTATCT GCAAGGCGCG CGCGATGCGA CGGTGCAATT CGCCAACCTC TACAGTCGCA AGACCGACTA CAAGGTGCGC AGCGATTACA TCGCCTTCCT CGACGATCTC GAACAGAATT TCGCGGCCCG GAAAGAGACG CTTCTGATCG ACGATCGCAC CAATTTCGAC GTGGAGATTG AAGTCCTGCA AGACCGCCTG AACCGCGAAA CACAATATCT GGAACGACAG GGATAA
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Protein sequence | MAKRFGGQHS PTGQRDGDTP REMVSHQKME IAPFKGRKPM RHGAKLNILF ILPLLTIFSV LFNSGVLEMA TDLAGGAVLL LSAWLTRDGV RAEDAFNERK VARKPAIPRK IFGAVGTGLG VALLILGGSN YGVQSLVSAN VVGILAAALH LFSFGLDPLK NKGMEGMDTF TSDRVARKID EAEALLAEQK DAIARVRDPQ LEARVERFQD VARGLFRQVE EDPRDLNAAR RYLGVYLQGA RDATVQFANL YSRKTDYKVR SDYIAFLDDL EQNFAARKET LLIDDRTNFD VEIEVLQDRL NRETQYLERQ G
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