Gene Jann_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1853 
Symbol 
ID3934304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1840144 
End bp1841079 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID637904207 
Producthypothetical protein 
Protein accessionYP_509795 
Protein GI89054344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.266553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0134195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGC GCTTCGGGGG CCAACACAGC CCCACAGGTC AAAGAGACGG CGATACCCCG 
CGCGAGATGG TGAGCCATCA GAAGATGGAG ATTGCCCCCT TCAAGGGTCG CAAACCCATG
CGGCACGGGG CCAAGCTGAA CATCCTGTTC ATCCTGCCAC TGCTGACGAT CTTCTCCGTG
CTGTTCAACT CCGGCGTGCT GGAAATGGCC ACGGATCTGG CGGGCGGCGC GGTTCTGCTG
TTGTCGGCCT GGCTGACGCG CGACGGCGTG CGGGCAGAAG ATGCCTTCAA CGAGCGCAAG
GTCGCCCGCA AGCCCGCGAT CCCGCGCAAG ATTTTTGGCG CTGTCGGCAC CGGGTTGGGC
GTGGCGCTGC TGATTTTGGG CGGGTCGAAT TATGGCGTGC AATCGCTGGT ATCCGCCAAT
GTTGTGGGCA TCCTGGCCGC GGCCCTTCAC CTGTTCTCCT TCGGGCTCGA CCCCCTGAAA
AACAAGGGGA TGGAGGGGAT GGACACCTTC ACTTCGGACC GCGTGGCGCG CAAGATCGAT
GAGGCCGAGG CGCTTCTGGC AGAGCAAAAA GACGCCATCG CGAGGGTGCG CGACCCGCAG
TTGGAGGCGC GCGTGGAGCG GTTCCAGGAC GTGGCGCGCG GCCTGTTCCG CCAGGTGGAA
GAAGATCCCC GGGATCTGAA TGCGGCCCGC CGTTATCTGG GCGTCTATCT GCAAGGCGCG
CGCGATGCGA CGGTGCAATT CGCCAACCTC TACAGTCGCA AGACCGACTA CAAGGTGCGC
AGCGATTACA TCGCCTTCCT CGACGATCTC GAACAGAATT TCGCGGCCCG GAAAGAGACG
CTTCTGATCG ACGATCGCAC CAATTTCGAC GTGGAGATTG AAGTCCTGCA AGACCGCCTG
AACCGCGAAA CACAATATCT GGAACGACAG GGATAA
 
Protein sequence
MAKRFGGQHS PTGQRDGDTP REMVSHQKME IAPFKGRKPM RHGAKLNILF ILPLLTIFSV 
LFNSGVLEMA TDLAGGAVLL LSAWLTRDGV RAEDAFNERK VARKPAIPRK IFGAVGTGLG
VALLILGGSN YGVQSLVSAN VVGILAAALH LFSFGLDPLK NKGMEGMDTF TSDRVARKID
EAEALLAEQK DAIARVRDPQ LEARVERFQD VARGLFRQVE EDPRDLNAAR RYLGVYLQGA
RDATVQFANL YSRKTDYKVR SDYIAFLDDL EQNFAARKET LLIDDRTNFD VEIEVLQDRL
NRETQYLERQ G