Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1841 |
Symbol | |
ID | 3934292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1826195 |
End bp | 1827487 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637904195 |
Product | citrate synthase |
Protein accession | YP_509783 |
Protein GI | 89054332 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.040491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA CCAGAACCGC CACTTTGACC GTTGACGGAC AGACCGTCGA TCTGCCCATT CATTCGCCCA CCGCAGGCCC CGACGTCGTC GACATCGGCA AGCTCTATGG GCAGGCCGGT GTGTTCACCC ATGACCCGGG CTTCACCTCC ACCTCGGCGT GCGAATCGTC GATCACGTTC ATTGATGGTG ACAAGGGCGA GTTGCTGCAT CGCGGCTACC CCATCGACCA ACTGGCAAGC CAGTCCAACT ACATCGAAGT CTGCTTCCTG CTGCTTTATG GCTATCTGCC CTCGCGCGCG GAATACGACA AGTTCGAGAC GACCATTACC CACCACACCA TGCTGCACGA GCAGATGGCT AACTTCTTCC GGGGTTTCCG CCGGGACGCC CATCCCATGG CGGTCATGGT CGGCGTCGTG GGCGCAATGT CTGCGTTCTA TCACGACAGC ACCGATATCC ATGATGAGCA TCAGCGCGAG GTCGCCTCGC ACCGCCTGAT CGCCAAGATG CCGACGATTG CGGCCTGGGC CTATAAATAC ACCATCGGCC AGCCCTTCGT GTATCCGCGC AATGACATGA GCTACGCGGC CAACTTCCTG CGCATGTGCT TTGCGGTTCC GGCGGAGGAA TACGTGGTCG ACCCGATCCT TGAGAAGGCG ATGGACCGCA TCTTCACGCT CCATGCGGAT CACGAACAAA ACGCGTCCAC GTCGACCGTG CGTTTGGCCT CATCCTCCGG CGCCAATCCC TTCGCCTGCA TCGCCGCCGG GATTGCCTGC CTCTGGGGTC CGGCCCATGG CGGCGCGAAC CAGGCCTGTC TGGAGATGCT GAAGGAAATC GGCACGGTTG ACCGCATTCC AGAGTTTATC GCGCGGGCCA AGGACAAGAA CGACAGCTAC CGCCTGATGG GCTTTGGCCA CCGGGTCTAC AAGAACTTCG ATCCCCGTGC GACGGTGATG AAACAATCCG CCGACGAAGT GCTGGAGTTG CTTGGGGTTG AGGACAATCC GCTTCTGCAG GTCGCGATGG AGCTGGAAAA ACAGGCGCTG GCTGATCCCT ACTTCTCCGA GAAGAAGCTG TTCCCCAACG TCGATTTCTA CTCCGGCATT ATTCTAGAGG CGATGGGCTT TCCGACGTCA ATGTTCACAC CCATCTTCGC GCTGTCGCGC ACCGTGGGCT GGATTTCCCA ATGGAAAGAA CAGCTTGGCG ACCCAGCCCT GAAAATTGGC CGCCCCCGCC AGCTTTATAC TGGCGAGACG GCGCGCGATT ACGTGGACAT CAAAGACCGC TGA
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Protein sequence | MADTRTATLT VDGQTVDLPI HSPTAGPDVV DIGKLYGQAG VFTHDPGFTS TSACESSITF IDGDKGELLH RGYPIDQLAS QSNYIEVCFL LLYGYLPSRA EYDKFETTIT HHTMLHEQMA NFFRGFRRDA HPMAVMVGVV GAMSAFYHDS TDIHDEHQRE VASHRLIAKM PTIAAWAYKY TIGQPFVYPR NDMSYAANFL RMCFAVPAEE YVVDPILEKA MDRIFTLHAD HEQNASTSTV RLASSSGANP FACIAAGIAC LWGPAHGGAN QACLEMLKEI GTVDRIPEFI ARAKDKNDSY RLMGFGHRVY KNFDPRATVM KQSADEVLEL LGVEDNPLLQ VAMELEKQAL ADPYFSEKKL FPNVDFYSGI ILEAMGFPTS MFTPIFALSR TVGWISQWKE QLGDPALKIG RPRQLYTGET ARDYVDIKDR
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