Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1837 |
Symbol | |
ID | 3934288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1823148 |
End bp | 1823741 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637904191 |
Product | phosphoribosylglycinamide formyltransferase |
Protein accession | YP_509779 |
Protein GI | 89054328 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN |
TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.117962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTGC GGGTCGCGAT CCTGATCTCC GGCGGCGGGT CCAACATGGT CGCGCTGGCC CGGGACATGG TGGGCCATCA CCCCGCGCGG CCCTGTCTGG TCGTCTCAAA CGTTCCGGGG GCCGGAGGAT TGGCGAAGGC CGAGACCATG GGTATTCCGA CAGCCTGCGT GGATCATCGC GCGTTCAAAG GCGACCGCGC AGCGTTTGAG GCCGCTTTGC AGAAGGTGCT GATAGCCCAC ACCCCCGGTA TCCTGTGCCT CGCGGGGTTC ATGCGCATCC TGACGCCGGA CTTCGTCGCG GGGTGGGAGG GGCAGATGCT GAACATCCAT CCTTCCCTTT TGCCGCTCTA CAAAGGTCTC AACACCCATG CCCGCGCGAT TGAAGCCGGC GATGCCGAGG CCGGATGCAC GGTCCATGAG GTCACGGCGG CGCTGGATGA CGGACCAATC CTCGGTCAGG CCCGCGTGCC GATCCAGTCC GATGACACGC CTGAGGCCCT TGCCGCGCGC ATTTTGCCGC TGGAACACCG CCTCTACCCT GCCGTTTTGC GGCGTTTTGC CAGCGGAGAC CGGACCAAGT TGAAGCTCAG CTAA
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Protein sequence | MSLRVAILIS GGGSNMVALA RDMVGHHPAR PCLVVSNVPG AGGLAKAETM GIPTACVDHR AFKGDRAAFE AALQKVLIAH TPGILCLAGF MRILTPDFVA GWEGQMLNIH PSLLPLYKGL NTHARAIEAG DAEAGCTVHE VTAALDDGPI LGQARVPIQS DDTPEALAAR ILPLEHRLYP AVLRRFASGD RTKLKLS
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