Gene Jann_1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1837 
Symbol 
ID3934288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1823148 
End bp1823741 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content65% 
IMG OID637904191 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_509779 
Protein GI89054328 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.117962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGC GGGTCGCGAT CCTGATCTCC GGCGGCGGGT CCAACATGGT CGCGCTGGCC 
CGGGACATGG TGGGCCATCA CCCCGCGCGG CCCTGTCTGG TCGTCTCAAA CGTTCCGGGG
GCCGGAGGAT TGGCGAAGGC CGAGACCATG GGTATTCCGA CAGCCTGCGT GGATCATCGC
GCGTTCAAAG GCGACCGCGC AGCGTTTGAG GCCGCTTTGC AGAAGGTGCT GATAGCCCAC
ACCCCCGGTA TCCTGTGCCT CGCGGGGTTC ATGCGCATCC TGACGCCGGA CTTCGTCGCG
GGGTGGGAGG GGCAGATGCT GAACATCCAT CCTTCCCTTT TGCCGCTCTA CAAAGGTCTC
AACACCCATG CCCGCGCGAT TGAAGCCGGC GATGCCGAGG CCGGATGCAC GGTCCATGAG
GTCACGGCGG CGCTGGATGA CGGACCAATC CTCGGTCAGG CCCGCGTGCC GATCCAGTCC
GATGACACGC CTGAGGCCCT TGCCGCGCGC ATTTTGCCGC TGGAACACCG CCTCTACCCT
GCCGTTTTGC GGCGTTTTGC CAGCGGAGAC CGGACCAAGT TGAAGCTCAG CTAA
 
Protein sequence
MSLRVAILIS GGGSNMVALA RDMVGHHPAR PCLVVSNVPG AGGLAKAETM GIPTACVDHR 
AFKGDRAAFE AALQKVLIAH TPGILCLAGF MRILTPDFVA GWEGQMLNIH PSLLPLYKGL
NTHARAIEAG DAEAGCTVHE VTAALDDGPI LGQARVPIQS DDTPEALAAR ILPLEHRLYP
AVLRRFASGD RTKLKLS