| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1833 |
|---|
| Symbol | |
|---|
| ID | 3934283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1818999 |
|---|
| End bp | 1820306 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637904186 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_509775 |
|---|
| Protein GI | 89054324 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.276388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.18394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCGT CGACCTGGAT CAAGCAATTT CTGCCGCGTG GCCTTTACGG GCGTGCGGCC
CTGATCCTGA TCGTGCCCGT GGTCACGATC CAGCTTGTAG TCAGTTCCGT CTTTCTGCAA
CGCCATTTCG AGGACGTGAC GCGGGAGATG ACGAGCGCGC TGAGCCTCGA TCTGAACCTG
GTGCTGGACA CTCTTGCACG CTCTGGACCC GAGGTCGCCA CGGCGCTTGC GGATGCGTTG
GAGATCGAAA TCGTGACGCC CGGACAGGCG AACGGAGATG CACGCTATTT CTACGACCTT
TCGGGCGTTG TTGTCATCGA AGTTCTGCGC GCGCGCATGT CCGGTGTGCA GGCCGTCGAT
CTGCGCATGG ATGAGCGGCG GGTCTATGTT GAGCTGGCCC GCGAGGGTGG GGCGCCCATG
GCGTTTGATA TCTCTCGGCG TCGCGCCTCG GCGCCTGCGC CGCACCAGCT TCTGGTGATC
ATGGTGGCGA CGGGCATATT GATGACGCTT GTCGCGTATT TGTTTCTGCG CAACCAATTA
CGGCCGATCC GCCGCCTTGC GGTTGCGGCG GAGGCGTTCG GTAAGGGCAG GCGGACGGAA
TACCACCTTT CGGGTGCCAC GGAAGTTCGC TCGGCCGGGC GCGCGTTTCT GGATATGCGG
GGCCGGATCG AAGGATATCT GGAACAGCGC ACGCTGATGC TGTCGGGCGT GAGCCACGAC
CTGCGCACAC CGCTGACGCG GATGCGGTTG GCATTGGGGA TGATGGAGGA CGGCCCGGAC
CGCGATGCAT TGGTTCAGGA TGTGGAAGAG ATGGAGGTGC TGGTCGCCAC CTTCCTCGAT
TTCGTGCGGG GCGACGCGCT TGATGATCCC GAATCCGTGG ACCCGCTGGC GCTGGTGGCG
GACGTCGTGG AGAAGGCCCG GCGGGGCGGT GGCGAAATTG CGCTGGATCT GCCCGACGCG
ATGGCACCCG CCATGGTGCG CCCCATGGCC GTGCAGCGCG CGGTGACGAA CCTTGTGGCC
AACGCCCTGC GCTACGGGGG GCGTGCGGCG GTTTCCGTCA CGGTGCAGGA GCGCACATTC
CGCATCACGG TGGAGGATGC GGGCCCGGGT ATTCCCGAGG ATCAACGCGC CGACGCTTTG
CGCCCTTTCA TCCGCCTCGA CACCTCGCGC AACCAGAACC AGGGCTCGGG CGTCGGGCTG
GGGCTGGCGA TCACCGAGGA CATCACCCGC CGCCACGGCG GATCCCTAGC CCTGAGTGAG
AGCGCCAAGA TGGGTGGTCT GCGGGTGGAT CTGACGCTCC CAAGGTGA
|
|---|
| Protein sequence | MTPSTWIKQF LPRGLYGRAA LILIVPVVTI QLVVSSVFLQ RHFEDVTREM TSALSLDLNL
VLDTLARSGP EVATALADAL EIEIVTPGQA NGDARYFYDL SGVVVIEVLR ARMSGVQAVD
LRMDERRVYV ELAREGGAPM AFDISRRRAS APAPHQLLVI MVATGILMTL VAYLFLRNQL
RPIRRLAVAA EAFGKGRRTE YHLSGATEVR SAGRAFLDMR GRIEGYLEQR TLMLSGVSHD
LRTPLTRMRL ALGMMEDGPD RDALVQDVEE MEVLVATFLD FVRGDALDDP ESVDPLALVA
DVVEKARRGG GEIALDLPDA MAPAMVRPMA VQRAVTNLVA NALRYGGRAA VSVTVQERTF
RITVEDAGPG IPEDQRADAL RPFIRLDTSR NQNQGSGVGL GLAITEDITR RHGGSLALSE
SAKMGGLRVD LTLPR
|
|---|
| |