Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1833 |
Symbol | |
ID | 3934283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1818999 |
End bp | 1820306 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637904186 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_509775 |
Protein GI | 89054324 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.276388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.18394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCGT CGACCTGGAT CAAGCAATTT CTGCCGCGTG GCCTTTACGG GCGTGCGGCC CTGATCCTGA TCGTGCCCGT GGTCACGATC CAGCTTGTAG TCAGTTCCGT CTTTCTGCAA CGCCATTTCG AGGACGTGAC GCGGGAGATG ACGAGCGCGC TGAGCCTCGA TCTGAACCTG GTGCTGGACA CTCTTGCACG CTCTGGACCC GAGGTCGCCA CGGCGCTTGC GGATGCGTTG GAGATCGAAA TCGTGACGCC CGGACAGGCG AACGGAGATG CACGCTATTT CTACGACCTT TCGGGCGTTG TTGTCATCGA AGTTCTGCGC GCGCGCATGT CCGGTGTGCA GGCCGTCGAT CTGCGCATGG ATGAGCGGCG GGTCTATGTT GAGCTGGCCC GCGAGGGTGG GGCGCCCATG GCGTTTGATA TCTCTCGGCG TCGCGCCTCG GCGCCTGCGC CGCACCAGCT TCTGGTGATC ATGGTGGCGA CGGGCATATT GATGACGCTT GTCGCGTATT TGTTTCTGCG CAACCAATTA CGGCCGATCC GCCGCCTTGC GGTTGCGGCG GAGGCGTTCG GTAAGGGCAG GCGGACGGAA TACCACCTTT CGGGTGCCAC GGAAGTTCGC TCGGCCGGGC GCGCGTTTCT GGATATGCGG GGCCGGATCG AAGGATATCT GGAACAGCGC ACGCTGATGC TGTCGGGCGT GAGCCACGAC CTGCGCACAC CGCTGACGCG GATGCGGTTG GCATTGGGGA TGATGGAGGA CGGCCCGGAC CGCGATGCAT TGGTTCAGGA TGTGGAAGAG ATGGAGGTGC TGGTCGCCAC CTTCCTCGAT TTCGTGCGGG GCGACGCGCT TGATGATCCC GAATCCGTGG ACCCGCTGGC GCTGGTGGCG GACGTCGTGG AGAAGGCCCG GCGGGGCGGT GGCGAAATTG CGCTGGATCT GCCCGACGCG ATGGCACCCG CCATGGTGCG CCCCATGGCC GTGCAGCGCG CGGTGACGAA CCTTGTGGCC AACGCCCTGC GCTACGGGGG GCGTGCGGCG GTTTCCGTCA CGGTGCAGGA GCGCACATTC CGCATCACGG TGGAGGATGC GGGCCCGGGT ATTCCCGAGG ATCAACGCGC CGACGCTTTG CGCCCTTTCA TCCGCCTCGA CACCTCGCGC AACCAGAACC AGGGCTCGGG CGTCGGGCTG GGGCTGGCGA TCACCGAGGA CATCACCCGC CGCCACGGCG GATCCCTAGC CCTGAGTGAG AGCGCCAAGA TGGGTGGTCT GCGGGTGGAT CTGACGCTCC CAAGGTGA
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Protein sequence | MTPSTWIKQF LPRGLYGRAA LILIVPVVTI QLVVSSVFLQ RHFEDVTREM TSALSLDLNL VLDTLARSGP EVATALADAL EIEIVTPGQA NGDARYFYDL SGVVVIEVLR ARMSGVQAVD LRMDERRVYV ELAREGGAPM AFDISRRRAS APAPHQLLVI MVATGILMTL VAYLFLRNQL RPIRRLAVAA EAFGKGRRTE YHLSGATEVR SAGRAFLDMR GRIEGYLEQR TLMLSGVSHD LRTPLTRMRL ALGMMEDGPD RDALVQDVEE MEVLVATFLD FVRGDALDDP ESVDPLALVA DVVEKARRGG GEIALDLPDA MAPAMVRPMA VQRAVTNLVA NALRYGGRAA VSVTVQERTF RITVEDAGPG IPEDQRADAL RPFIRLDTSR NQNQGSGVGL GLAITEDITR RHGGSLALSE SAKMGGLRVD LTLPR
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