Gene Jann_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1829 
Symbol 
ID3934278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1815618 
End bp1816775 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content65% 
IMG OID637904181 
Productpeptidase M24 
Protein accessionYP_509771 
Protein GI89054320 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.311411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGG ATCGCGGCTT TCCGGACACG GAGTTCCAGG CCCGTACCGC CCGTGCGCAG 
TCGATGATGG AACAGGCAGG TCTGGGCGCG CTGCTCCTGA CGACGGAGCC GGAAGTGCGC
TACTATACCG GGTTTCTGAC GCGCTTCTGG GAAAGCCCCA CACGCCCCTG GTTCGTTGTG
ATCCCGGCCT CTGGTGCGCC CATCGCCGTG ATCCCCAGCA TTGGCGCGCA CCTGATGGGA
CAGACTTGGA TCACAGACAT CCGCACATGG GCCGCGCCCG ATTATGACGA TGACGGTGTG
GGTCTGTTGG CCGAAACACT GTGCGAGATT ACGCCTGCCG ATGCTCATGT CGGGCTTGCC
GACCAGATGG AAAGCCACCT GCGGATGCCG CTTTCCAGTC TTCGTAGGCT GGAGCACTCC
ATCGGCCCCC GCCGCATCAC TGGCGACGCG ACCATCACGC GCCGCCTGCG CCTGGTGAAA
TCGCCGTTGG AACTGGCCAA GATCACCCAT GCGGTCCAGA TCGCCGACCG TGCCTTTGAC
CGTGTGCCAG AGGTTGCGCG GACGGGCATA TCCCTGTCGC AGGTCTTTCG CGATTTTCAA
CGGCTGTGTC TGGAGGAGGG CGCCGATTGG GTGCCCTATC TGGCTGGCGC GGCAGCGGTA
GGGGGATACG GTGACGTCAT CTCCCCCGCG ACCGATGCGC CGCTGGCTTT GGGGGATGTC
CTGATGCTTG ACACCGGCCT CATCTGGGAC GGATACTTCT GCGACTTCGA CCGGAACTTC
AGCCTGGGGC CGCCAGATGC ACAGGTTGCG GACGGCCACG CGGCCCTGAT CGCGGCGACA
CAGGCAGGAC ATGCGGTTGC CAAGCCGGGC GCACGGATCT GCGATCTGTT CCACGCGATG
AATGATATCG TGAGCCCGGG CAGTGCGGCG TCGGATGCGG GGCGGCTGGG GCACGGGCTG
GGGATGCAGC TGACGGAATG GCCCTCAATC ATCGCCGCCG ACACGACGGT GCTGGAGGAG
GGGATGGTGC TGACCCTGGA GCCGGGGATC ACGCTGCCGT CGGGCAAGAT CCTGGTCCAT
GAAGAGAATA TCGTCATCGA AGGGCAGGGC GCGCGGTATC TGTCGCGGCC TCAACCCCCG
GAGATCCGTG TCATATGA
 
Protein sequence
MTPDRGFPDT EFQARTARAQ SMMEQAGLGA LLLTTEPEVR YYTGFLTRFW ESPTRPWFVV 
IPASGAPIAV IPSIGAHLMG QTWITDIRTW AAPDYDDDGV GLLAETLCEI TPADAHVGLA
DQMESHLRMP LSSLRRLEHS IGPRRITGDA TITRRLRLVK SPLELAKITH AVQIADRAFD
RVPEVARTGI SLSQVFRDFQ RLCLEEGADW VPYLAGAAAV GGYGDVISPA TDAPLALGDV
LMLDTGLIWD GYFCDFDRNF SLGPPDAQVA DGHAALIAAT QAGHAVAKPG ARICDLFHAM
NDIVSPGSAA SDAGRLGHGL GMQLTEWPSI IAADTTVLEE GMVLTLEPGI TLPSGKILVH
EENIVIEGQG ARYLSRPQPP EIRVI