Gene Jann_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1827 
Symbol 
ID3934276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1814139 
End bp1814465 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content65% 
IMG OID637904179 
Producthypothetical protein 
Protein accessionYP_509769 
Protein GI89054318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.266865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TCGCAATCAT CGCCGCCCTT GCCGCTTCTA TCGCCGCTCC GGCCGTCGCA 
CAATCCACCT CCACAGCCTT CGCCATCGCG CATTTCAACA TGTCCGCTGA GCGTCAGTCC
GACATCATCC CGCTGCCTGG ACAAAACGCA TCCGGTCGCA GCGACCGCGC CCTGGCTGAG
GCCTTCGCGA TCTTCAACCA GACCGCCGAC ACCCCCGGTG AGTTGCGCGG CGTCGTCAAC
ACCACGCCCG TCTCCGCTGA GTCGGCGGCC CGCGCCCAGG ACATCTTCGC CCGCCTGCGC
GCAGAATCCC GCGAAGACGC CGAGTAA
 
Protein sequence
MKKIAIIAAL AASIAAPAVA QSTSTAFAIA HFNMSAERQS DIIPLPGQNA SGRSDRALAE 
AFAIFNQTAD TPGELRGVVN TTPVSAESAA RAQDIFARLR AESREDAE