| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1817 |
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| Symbol | |
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| ID | 3934266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1807252 |
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| End bp | 1807830 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904169 |
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| Product | hypothetical protein |
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| Protein accession | YP_509759 |
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| Protein GI | 89054308 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.384251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAGCC AAGACATCCC CCGCCTCGTT TATCTGATCG TGCTGCTCTG TGCGGTTGGC
GGCTATTTCT TCTGGGGTCA GCGCCGGAAC ATGGGGCAAA TGGCGCGATA TCTGGCGATC
TGGGGCTTCA TTTTCCTGGG ATTCATCGTC GCGATTGGCC TTTGGACTGA TCTGTCGAAC
TCCATGGCGC CGCGCCAATC GGTGATGCAG ACTGGCGCGG TCGAGGTCCC TCGCGCCTCG
GACGGGCACT TTTACCTGAC CCTCGATGTG AACAGCGTAC CCACGCGCTT TGTGGTGGAT
ACCGGCGCTA CGGCGATTGT GTTGAGCCAG GCCGACGCCG CGCGTGCAGG CCTTGATATC
GACAATCTGA TTTACTCGGG CCGGGCTGAG ACCGCCAATG GCCGGGTCGA GACCGCCCCC
GCCCGTATCG AGACCCTGTC TTTGAACGGG ATCGTGGACG AGAATGTGCG TGCCATCGTC
AATGCCGGAG AGATGGACGG CAGTCTTCTG GGCATGTCCT ACCTGTCCCG TTTCTCGCGG
CTGGAGATCG CGGATGGGCG GCTGATCCTG CAACGCTAG
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| Protein sequence | MDSQDIPRLV YLIVLLCAVG GYFFWGQRRN MGQMARYLAI WGFIFLGFIV AIGLWTDLSN
SMAPRQSVMQ TGAVEVPRAS DGHFYLTLDV NSVPTRFVVD TGATAIVLSQ ADAARAGLDI
DNLIYSGRAE TANGRVETAP ARIETLSLNG IVDENVRAIV NAGEMDGSLL GMSYLSRFSR
LEIADGRLIL QR
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