| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1810 |
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| Symbol | pdxA |
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| ID | 3934259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1798449 |
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| End bp | 1799432 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637904162 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_509752 |
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| Protein GI | 89054301 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.693301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.184814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGCCC TGCCCATTGC GCTCTCCGTC GGTGAGCCCG CGGGCATTGG CCCCGAGATT
GCCGCCCGCG CCTGGGCCGC ATTGGGTGCG GAGATCCCGT TCTTCGTGAT CGGCGACCCG
GCGCATCTGG CAGGCCATGG CGCGCCTCTG GTTAAGGTGG CCAAGGCATC CGAAGCCGTT
GCTGCCTGCC GCGACGGCCT GCCCGTTTTG CCCCATAGCT TCGCCGAACC TGCAGTTCCC
GGCCGACCCG ATCCGGCCAA CGCCCAGGGC GTGATCGACG TGATCGCGCG CGGCGTGGAT
CTGGTGATGC GGGGGGAGGC TGCGGCGCTC ACCACCGGGC CGATCCACAA GAAGGCGCTG
AAGGACGGCG CGGGCTTCGC CTTCCCGGGC CACACCGAAT ATCTGGCGCA TCTGGCTGGG
GTAAGGCAGG TGGTGATGAT GCTCGCCTGC CCGGAGCTGC GTGTGGTGCC GGTGACGATC
CACATCCCCG TCGCGGAGGT GCCCCGTTTG CTGACCGCAA AGTTGCTCCG CGATACCATT
CGCATCACCG AGGCCGCGTT GCGGCAGGAT TTCGGGATCG CGAGGCCTCG GATCGCGGTC
GCGGGCCTCA ACCCCCATGC AGGCGAAGGT GGGGCCATGG GCCGTGAGGA AATCGAGTTG
ATTACACCGG TGCTGGACGA ATTGCGGGCC AATGGACTGA CCATCAACGG GCCTGCCTCT
GCCGATACAA TGTTCCACGC AAGCGCTCGG GCGGGTTATG ACGTTGCAAT CGCGATGTAC
CACGATCAGG CCCTGATCCC GATCAAGACG GTGGATTTCT CGGGCGGGGT GAACGTGACC
CTCGGCCTGC CATTCATCCG CACGTCACCG GACCACGGCA CGGCGTTTGA TATCGCGGGC
CAGGGCATCG CCGATGCGAC ATCGCTGATT GCCGCGTTGA AAATGGCGCG CGATATGGCT
GTGGCGCGGG GCGAGACCCG ATGA
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| Protein sequence | MAALPIALSV GEPAGIGPEI AARAWAALGA EIPFFVIGDP AHLAGHGAPL VKVAKASEAV
AACRDGLPVL PHSFAEPAVP GRPDPANAQG VIDVIARGVD LVMRGEAAAL TTGPIHKKAL
KDGAGFAFPG HTEYLAHLAG VRQVVMMLAC PELRVVPVTI HIPVAEVPRL LTAKLLRDTI
RITEAALRQD FGIARPRIAV AGLNPHAGEG GAMGREEIEL ITPVLDELRA NGLTINGPAS
ADTMFHASAR AGYDVAIAMY HDQALIPIKT VDFSGGVNVT LGLPFIRTSP DHGTAFDIAG
QGIADATSLI AALKMARDMA VARGETR
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