| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1809 |
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| Symbol | ksgA |
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| ID | 3934258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1797474 |
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| End bp | 1798391 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637904161 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_509751 |
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| Protein GI | 89054300 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.957431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.3003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCATC CCCCCGAGAG GTGTATGGCC AAGATGAAGG AGCGGCGCAT GGTGGCCATT
GACGGGCTTC CCCCGCTGCG GGACGTCATT GCGGCCCACG GGTTGTCGGC GCGAAAGGCG
CTGGGGCAGA ACTTTCTGCT GGACCTGAAC CTGACGGCGA AGATTGCGCG GCTGGCTGGG
GATTTGACCA GCGTCGATGT GTTAGAAGTG GGCCCCGGCC CCGGTGGCCT GACCCGTGGG
TTATTGGCAG AGGGCGCACG CCGGGTGGTG GCCGTGGAGA AAGACCCCCG TTGCCTGCCC
GTGCTGGCGG AGATTGAGGC CATCTATCCC GGCCGTCTCA AGGTTTTGAA CGCCGACGCG
TTGGAGCTGG ATTGGGCGGC GGACCTGCAA GCCCCCCGCA AGATCGTCGC CAATCTGCCC
TACAATGTGG GTACGGAATT GCTTGTCCGC TGGCTCACCC CCGCGTCCTG GCCGCCCCCG
TGGGAGAGCC TGACCCTGAT GTTCCAGCGC GAAGTGGCGG AGCGGATCGT GGCGCAGCCC
GGCTCCAAAA CCTACGGACG CCTTGCGATC CTGTCGCAAT GGCGGGCCGA TCCACGGATC
GTGATGGGCC TGCCGCCGGA GGCGTTCACC CCGCCGCCCA AGGTCCATTC GGCGGTGGTC
CACTTTACCG CCCTGCCTGC GCCCCGGTTC CCGGCGGACG CCCGCGTTCT GACCCGCGTT
GTGGCTGCTG CGTTCGGGCA GCGCCGCAAG ATGTTGCGCG CCGCGTTGAA GGGCTTGGCC
CCGGATATTG AGGATCGTCT GGTTGCCGCC GGACTAAAAC CCACGGATCG CGCGGAGCAG
GTGCCGCTGG AGGGCTTCTG CGCCCTCGCC CGCGTCATGG AGGATGTCAT CACGCCAAGC
CACGGGCGCG AGGCATAA
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| Protein sequence | MPHPPERCMA KMKERRMVAI DGLPPLRDVI AAHGLSARKA LGQNFLLDLN LTAKIARLAG
DLTSVDVLEV GPGPGGLTRG LLAEGARRVV AVEKDPRCLP VLAEIEAIYP GRLKVLNADA
LELDWAADLQ APRKIVANLP YNVGTELLVR WLTPASWPPP WESLTLMFQR EVAERIVAQP
GSKTYGRLAI LSQWRADPRI VMGLPPEAFT PPPKVHSAVV HFTALPAPRF PADARVLTRV
VAAAFGQRRK MLRAALKGLA PDIEDRLVAA GLKPTDRAEQ VPLEGFCALA RVMEDVITPS
HGREA
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