Gene Jann_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1799 
Symbol 
ID3934248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1788579 
End bp1788992 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content60% 
IMG OID637904151 
ProductFUR family manganese uptake regulator 
Protein accessionYP_509741 
Protein GI89054290 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.417665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CAATCGAGGA TCGCTGCACA GCCAAGGGCC TGCGCATGAC CGAGCAACGC 
CGCGTGATCG CGCGTGTGCT GGAACGCTCG GACGATCATC CGGACGTGGA AGAGCTTTAT
GCCCGTGCGG TGGCGGTCGA CCCCAAGATC TCCATTGCGA CGGTCTACCG GACGGTGAAG
CTGTTTGAGG AGGCAGGCAT CCTCGACAAG CTGGAATTCG GCGATGGCCG CGCGCGCTAT
GAGGATGCGG AGCGGGACCA CCATGATCAC CTGATCGATA TGAATTCAGG CGAGGTGATC
GAGTTCGTCG ACGCTGAGAT TGAGGCCTTG CAGGAGAGGA TTGCCGAGAA GCTGGGATAT
CGGCTGAAGG GGCATCGGTT GGAGTTGTAC GGCGTGCCCT TGAAGAAGGG GTGA
 
Protein sequence
MTDTIEDRCT AKGLRMTEQR RVIARVLERS DDHPDVEELY ARAVAVDPKI SIATVYRTVK 
LFEEAGILDK LEFGDGRARY EDAERDHHDH LIDMNSGEVI EFVDAEIEAL QERIAEKLGY
RLKGHRLELY GVPLKKG