Gene Jann_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1795 
Symbol 
ID3934244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand- 
Start bp1783515 
End bp1784249 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID637904147 
Producthypothetical protein 
Protein accessionYP_509737 
Protein GI89054286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0285646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.335298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCA CACTTCTGTC AGGGCCATTC GTGCCCTTTA CCCTGTCCCT CGCCCTCCTC 
TTTGGCCTGT TGGCTCTGGA GGTGGTGGTT CTGCTGCTTG GCGGGTCGCT CATGGGCGAT 
AGCGGTGAGG TGGACGGGCC GGAGTTTGAG GCCGGTTTTG ACGCAGAAAT GGACTTCGAC 
ATCGAGTTGG AGGCCATCGA TATGGATGCG CTCGACGTGG ATGTGGCCGA TCTGGAGGTG 
GCAGATTTCG ACCTGGAGGC CGGAGAAGTC GCCGCGGCCA CGCCCTCGCC CCTTGGCTGG 
ATGGGTCTGG GCAAGATGCC CACGCTGATC TGGCTGGCCT GCCTGTTCAT GGCCTTCGGC 
GTCGCCGGAA TGGCCTTGCA GGGCGCGGCC AGCGCACTCC TCGGCGGGCC GATCCCGGCC 
CTTCTCGCAG CGGTGCCGTG TGGATTGACC GCCGTATGGT TCACGGGCCG GTTTGGCGCG 
CTGTTCGCGC GGTTGATCCC GCGGTCTGAA AGCCAGAGCG TCTCGTCGCG CCAATTGGGC 
CGCCGCAAGG GCATTGTCAC CCAAGGCACG GCCCGTCGGG GTGTCCCGGC AGAGGTTCGG 
GTCACGGACC GCTATGGCAA CACCCACCAC CTGAGGGCCG AACCCCTCAA AGACACCGAC 
GCCCTTCCCC AAGGCACAGA GGTTCTTGTT CTGCGCCACC GCCCCACCGG CGGGTTTCGT 
CTGATCGCGC TCTGA
 
Protein sequence
MLGTLLSGPF VPFTLSLALL FGLLALEVVV LLLGGSLMGD SGEVDGPEFE AGFDAEMDFD 
IELEAIDMDA LDVDVADLEV ADFDLEAGEV AAATPSPLGW MGLGKMPTLI WLACLFMAFG 
VAGMALQGAA SALLGGPIPA LLAAVPCGLT AVWFTGRFGA LFARLIPRSE SQSVSSRQLG 
RRKGIVTQGT ARRGVPAEVR VTDRYGNTHH LRAEPLKDTD ALPQGTEVLV LRHRPTGGFR 
LIAL