Gene Jann_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1794 
Symbol 
ID3934243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1781787 
End bp1783469 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content63% 
IMG OID637904146 
Productband 7 protein 
Protein accessionYP_509736 
Protein GI89054285 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.511769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.250281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTA TTCTGATTAT CGTCGCCGCC GTCATTGGCT TTCTGGTCTT TGCGGGCCTG 
ATCATCGGGC GGCTCTACAA GCGCACGACG CGAGAGCTGT CGTTGGTGAA GACGGGTGCC
GGTGGCAAGA AGGTGATCAT GGATGGCGGC ACGTTGGTGA TCCCGCTTCT TCATGAAGTG
TCGCCCGTCA ACATGAAGAC CCTGCGCCTG GAGGTTCGCC GCACCGGAGA AGGCGCGCTG
ATCACGCAGG ACCGGATGCG TGTGGACGTG GGCGTGGAGT TTTACGTTTC TGTCATGGCA
ACTGACGAGG GGATCGCGCG GGCGGCCCAA ACGCTCGGTG ACCGGACGTT TTATGTCGAT
CAGCTGCGCG AGATGATTGA GGGCAAACTG ATCGACGGCC TGCGAGCCGT GGCCGCGAAG
ATGACGATGG ACAGTCTGCA TGAAAACCGC TCGGACTTTG TGCAGCAGGT GCAGAATGCG
ATTTCTGAAG ATCTGTTGAA GAACGGTTTG TCGCTGGAAT CGGTCTCGCT CACCGCGCTG
GACCAGACAC CCTTCGAGAG CCTCGATGAA AACAACGCGT TCAACGCCGT CGGCATGCGC
AAACTGGCCG AGGTGATTGC AAAATCCAAG AAAGAACGTG CCGAGATTGA CGCCGATGCC
GAAGTGGCTG TGCGCCGCGC GGCCATGGAG GGGGAGCGCC AGAAGCTCTC CATCCAGCAG
GATGAAGAGC AGGCGGCGAT CGCTCAGGTG CAAGAGATCG AGACGATGAA AGCCGCCCAG
GAGATGGAGA TTTCGCTGCG TCGCGAGGAT TCGATGCGCG AGAGTGAACG CGCCCGGATT
GCCCGCGAAG AGCAGGTGCG CTCAGCCGAG ATTAACCGCG AGCGCAATAT CCGCGAGGCA
GAGATCTCCA AGGAGCGGGA GCTGGAAGTG GCGGAGCAAG AGCGCCAGAT CATCATCCAG
CAGAAGTCCG AGGAAGAGAG CCGCGCGCGG GCGTCGGCTG ACCTGGCAAG GGCTGAGGCG
ACAAAGGCCA CGGAAGCTGT GGCGACCGCC CGAGAGGTGG CAGAGGCCGA GCGTGTGAAG
CAGATCGCGC TGATTGAGGC GGCGCGGGAA GCCGAGCGCG AGGCGACCAA GATCCGCCTT
GCGGCTGCCG CCGAGAAAGA TGCGGCCCAG GACCGGGCCG ACGCCCGTCG CGAGGAAGCA
CAGGCCGAGG CCGATGCCAT CTCCATCCGC GCAGACGCCA AGAAAAAGGA CATGCTGGCA
GAGGCCGAAG GGACACGTGC GATCACCGAG GCCGAAAACG CGCTGTCGGA GCAGATCGTC
GGCATGAAGA TCGACATGGC CCGGATTGAG GCGATCCCTG GCATCATGGA GCAGATGGTC
AAGCCGGTAG AGAAGATCGG AGAGATCAAG ATCCATCAGG TCGGCGGTCT GGGTGGCGGC
CAAGGTGGCG GCGGCGCAGG TGGATCTGGC GGCGACAAGC CCGTGGTAAA CCAGGCGCTG
GATTCCATCA TGGGCATGGC GGTACAGATG CCGGCCCTGC GGAAGTTGGG CGACGAGCTG
GGGCTGAGCC TGGAAAGCGG TGTGGAAGGT CTGGCCGAAA GCGCGCTGAC AGCCCGGCCC
AACAACGCAC CTGCGGTGGA AGCGCCCAAG CCAGCCGCGG ACCCCGCCTC GCCCGCAGAG
TAA
 
Protein sequence
MEFILIIVAA VIGFLVFAGL IIGRLYKRTT RELSLVKTGA GGKKVIMDGG TLVIPLLHEV 
SPVNMKTLRL EVRRTGEGAL ITQDRMRVDV GVEFYVSVMA TDEGIARAAQ TLGDRTFYVD
QLREMIEGKL IDGLRAVAAK MTMDSLHENR SDFVQQVQNA ISEDLLKNGL SLESVSLTAL
DQTPFESLDE NNAFNAVGMR KLAEVIAKSK KERAEIDADA EVAVRRAAME GERQKLSIQQ
DEEQAAIAQV QEIETMKAAQ EMEISLRRED SMRESERARI AREEQVRSAE INRERNIREA
EISKERELEV AEQERQIIIQ QKSEEESRAR ASADLARAEA TKATEAVATA REVAEAERVK
QIALIEAARE AEREATKIRL AAAAEKDAAQ DRADARREEA QAEADAISIR ADAKKKDMLA
EAEGTRAITE AENALSEQIV GMKIDMARIE AIPGIMEQMV KPVEKIGEIK IHQVGGLGGG
QGGGGAGGSG GDKPVVNQAL DSIMGMAVQM PALRKLGDEL GLSLESGVEG LAESALTARP
NNAPAVEAPK PAADPASPAE