Gene Jann_1780 details

Gene Information

• Locus tag: Jann_1780
• ID: 3934228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 1768550
• End bp: 1769344
• Gene Length: 795 bp
• Protein Length: 264 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637904131
• Product: hypothetical protein
• Protein accession: YP_509722
• Protein GI: 89054271

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.443384
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.229108
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACCATG TTCTACAAGA TCATTTGCCG TCCGCGCCGT GGATGGCAGA GGCCACGCGC 
CGGTTGCCGG GCTTGCAGCC GTTGGAGAGC GGCGCGCCGT GGCTGCAAAG GGACGAGGCG 
TTTGCCGGAC AGATGGCGGT GCGGGATCAA CTGGTTGCAG AGCGCCGTGC GGAGGTGATT 
GCGCAAATGC CGGGCTGTCA GGGCGCCGTG GCGGAGTTAT ATGGCGCGGT GCTGCGAGGG 
CTCGCCGGGT GTGATGGCTA CGCGGTTGGG CGAGGGGCGT GTGTGCGCCC CGATGGCGTA 
GATGTGCCGT TGGACGAGGG CGACCCCCTC GGCACGTTGG CGCGGCTGGT GCAGCAGGAT 
CTGTGCGTTT TGGAGAAGCC CGAGGGCGGT ATGGAGCATG TAATGAGCGC CGCGATCCTG 
TGCTTTCCGG CCAGTTGGTC CCTGGCCGAG AAGATTGGCC ACCCGCTGTC GCGCATTCAC 
GGACCGGTGA CGGAGTATGA TGGTCTGATG GAGCGGCGGG TGCAGCGCGT GTTCGACCAT 
TTGCGAGAGG ACAGCCCGGT CTGGCGACAA AACGCGCTGA TCTACGACGA CCCGCAGCTG 
TTCCAGCCCC GCCGCATGGA CGCCAGGCGG CCCAAGCCCA CGGGCGCGGG GTATCTGCGG 
TCGGAAAAAC AGGTGCTGAT GCGGTTACCC GTCACGCGGG CGGTGGTGTT CTCGATCCAC 
ACCTATGTCG TGGCGATGGA GGATCTGACG GCGGATCAGC GCGCCGGGCT GGCGGGTGTT 
GACCGGGTGA CGTGA 

 

Protein sequence

MDHVLQDHLP SAPWMAEATR RLPGLQPLES GAPWLQRDEA FAGQMAVRDQ LVAERRAEVI 
AQMPGCQGAV AELYGAVLRG LAGCDGYAVG RGACVRPDGV DVPLDEGDPL GTLARLVQQD 
LCVLEKPEGG MEHVMSAAIL CFPASWSLAE KIGHPLSRIH GPVTEYDGLM ERRVQRVFDH 
LREDSPVWRQ NALIYDDPQL FQPRRMDARR PKPTGAGYLR SEKQVLMRLP VTRAVVFSIH 
TYVVAMEDLT ADQRAGLAGV DRVT