Gene Jann_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1770 
Symbol 
ID3934218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1758825 
End bp1759685 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content61% 
IMG OID637904121 
Productferredoxin--NADP(+) reductase 
Protein accessionYP_509712 
Protein GI89054261 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.830891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.623831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCG AGCAAACACC CGTGACCCAG ACCGACGCCG CGCCTGTGAA GGCGACCCCC 
ACCCTGCCCG ATGCGCAAAC CGTGACAGAG GTTAAGCATT ACACCGACCG TTTGTTCAGC
TTCCGCTGTA CGCGGCCCGC CTCCCTGCGG TTCCGGTCCG GTGAGTTTGT GATGATCGGC
CTGATGGGCG AACCGCACCC CGAGACGGGC AAGCAGAAGC CGCTGCTGCG CGCCTATTCC
ATCGCCTCGC CGTCTTGGGA TGAGGAATTG GAGTTCTACT CCATCAAGGT GCCCGACGGT
CCGCTGACAT CCCGCCTCCA GCACATCCAG CCCGGCGAAC AGATCATCCT GCGTCCCAAG
CCTGTGGGCA CGCTGGTCCA CGACGCGCTT CTGCCGGGCA AACGCCTGTG GTTCTTTGCG
ACCGGCACCG GGTTTGCCCC CTTCGCCAGC CTCCTGCGCG AGCCGCAGAC CTATGAGGAT
TATGACGAGA TCATCATCAC CCACACCTGC CGCGAAGTCG GGGAGCTGAC CTATGGCCGC
GACCTGATCG CGGCGTTGCA ACATGATGAG TTGCTCAATG AGGTGATCGG GGACGGCTTC
TGGAAGAAGA TCAAATATTA CCCGACCACC ACCCGTGAAG AGAGCCCGAA GATGGGCCGC
ATCACCGATC TGATGCGCAG CGGAGAGGCG TTCAGTGATC TGGGCGTGGC GCCCCTGAAC
GCCGAGACGG ACCGCGCGAT GATCTGCGGG AACCTGGCCT TCAATCTTGA GCTGAAAGAT
ATGTTCGAGG ATTACGGGTT GGAGGAAGGG GCGAATTCCA AGCCTGCACA TTATGTGGTC
GAGAAGGCGT TTCTGGACTA A
 
Protein sequence
MMTEQTPVTQ TDAAPVKATP TLPDAQTVTE VKHYTDRLFS FRCTRPASLR FRSGEFVMIG 
LMGEPHPETG KQKPLLRAYS IASPSWDEEL EFYSIKVPDG PLTSRLQHIQ PGEQIILRPK
PVGTLVHDAL LPGKRLWFFA TGTGFAPFAS LLREPQTYED YDEIIITHTC REVGELTYGR
DLIAALQHDE LLNEVIGDGF WKKIKYYPTT TREESPKMGR ITDLMRSGEA FSDLGVAPLN
AETDRAMICG NLAFNLELKD MFEDYGLEEG ANSKPAHYVV EKAFLD