| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1730 |
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| Symbol | |
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| ID | 3934178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1721642 |
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| End bp | 1722985 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637904081 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_509672 |
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| Protein GI | 89054221 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0814536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.731586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA CGCCCGTCCT TTTCGTCGAT GATGAGCCTG ATCTGCGGAT CGCGGGCGAG
CAGACCCTGT CACTGGCCGA TCTGCCGGTC ATTGCCTGCG CCCGGGCTGA GGCCGCCCTG
GATCACATTT CGCCCGCCTT TCCCGGGGTG CTGGTCACAG ATATCCGGAT GCCCGGCATG
GACGGAACCG CCCTGATGGC CGAAGCGCTC AGGCGCGACC CGGATCTGCC AGTGATATTG
GTGACGGGGC ACGGTGATGT GGACCTGGCG GTGCACAGCA TGCGGCTGGG GGCTTATGAC
TTCATCGAAA AACCCTACGC GCCGGACCGA TTGGTGCAAG TGATCCGCCG CGCGCTGGAC
AAGCGCCGCC TGACGATGGA GGTGCGCGCC CTGAAGGCGC AGGCCGCAGA TGGCAGCGCG
GATCCGATCT CCGCACAACT TATCGGGCGC TCCACCGCCA TGGCGCAGCT GCGCGCGCAA
TTGAAGGCGG TGGCCGAGAC GGAAACCGAT GTGTTGATCG AAGGGGCCAC CGGCACGGGC
AAGGAGGTGG CGGCGCGCGC GCTCCACGCG GCCTCGGCCC GGGCGGCCAG GCCCTTTGTC
GCGATCAATT GCGCCGCCCT GCCCGAGACG CTGATGGAAA GTGAGCTGTT TGGCCACGCT
CCAGGTGCCT TTGAAGGCGC CACACGGGAG CGTTACGGCA AGTTCCAGCA CGCCCGCGGT
GGCACCCTGT TTCTGGATCA GATCGACAGC ATCCCCCTGC CCCTGCAAGG CAAATTGCTG
ACCGCCCTGC AGGACCGCGC GATCACCCCC CTGGGCACGA ATGAAGCCGT TGCCCTTGAT
CTGCGCGTCA TCGCGGCCTC CAGACGCGAT CTGGCGCAAG CGGCGGCAGA GGGCGCGTTT
CGGGATGATC TGCTCTACCG CCTCAACGTT GTGACCCTGC GGATGCCGCC GCTGGCGGAG
CGGCGCGAAG ACATTCCCGG CCTCTTCCAG ATCCTGCTGG CCAATGCGTC CGCCCGGCAC
AACCGTCCGG TGCCTGCGGT CTCGCCCGAT ATGCTGGCAG ATCTCGCCTC ACGCGACTGG
CCCGGCAATA TCCGCGAGCT GCGCAATGAG GCCGAGCGCG CGATCCTGGG GCTGGGACAT
GGCGGCGCGG CGTCGGAGAC GGGACGGCTT GCCGATCAGA TGGCCGCCCA TGAACGCAGC
CTGATTGCCG CTACACTCAG CGCCCAGAAC GGCTCGATCA AGGCGACATA TGAGGCGCTG
GGGATCAGCC GCAAAGCCCT CTACGAGAAG ATGCAGAAAC ACGGGCTTGC GCGCGACGAC
TTTCGTCCCG CCGACCGCGC GTAA
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| Protein sequence | MTQTPVLFVD DEPDLRIAGE QTLSLADLPV IACARAEAAL DHISPAFPGV LVTDIRMPGM
DGTALMAEAL RRDPDLPVIL VTGHGDVDLA VHSMRLGAYD FIEKPYAPDR LVQVIRRALD
KRRLTMEVRA LKAQAADGSA DPISAQLIGR STAMAQLRAQ LKAVAETETD VLIEGATGTG
KEVAARALHA ASARAARPFV AINCAALPET LMESELFGHA PGAFEGATRE RYGKFQHARG
GTLFLDQIDS IPLPLQGKLL TALQDRAITP LGTNEAVALD LRVIAASRRD LAQAAAEGAF
RDDLLYRLNV VTLRMPPLAE RREDIPGLFQ ILLANASARH NRPVPAVSPD MLADLASRDW
PGNIRELRNE AERAILGLGH GGAASETGRL ADQMAAHERS LIAATLSAQN GSIKATYEAL
GISRKALYEK MQKHGLARDD FRPADRA
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