Gene Jann_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1719 
Symbol 
ID3934167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1703412 
End bp1703999 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content63% 
IMG OID637904070 
Producthypothetical protein 
Protein accessionYP_509661 
Protein GI89054210 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.986012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.328993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTT CTCCCACAAA TGAGATTGCC AGCGACGTTG TCGCGTTCTG GGTCGGGGCC 
GGGCCGCAGA AGTGGTACGT GCAGGATGAC GCGTTCGACC AGGAGATCCG CGACCAGTTC
GGCCAGGTCT GGCGGGCGGC GCAGGACGGT CATCTGCCCG ATTGGGCCAG CGATGCCGAC
GGCGCCCTGG CGCTGGTGAT CCTGTTGGAC CAGTTCCCGC GCAACATGTT TCGCAACGAT
CCCCGCGCCT TCGCGACCGA TGACAAGGCC TTGGTCGTCA CCGGCGATTG CCTGGCCCAT
GGCTGGGACA GAGAGGTGGC TGAGCCTGAG CGCCAGTTCA TCTATATGCC GCTGATGCAT
TCGGAAAATA TGGATCACCA GGATCGCTGT GTTGAGCTGA TGAAGGCGCG CATGTCTGAG
GGCAACAATG AGCTTCACGC CCGCGCCCAC CGGGAGATTA TCGCGCGGTT CGGGCGGTTC
CCGTTCCGCA ATGCGGCTCT CAGCCGTGAG ACGACGGCGG AGGAGCAGGA TTTTCTGGAC
AATGGCGGCT ATCGGGCGAT CGTGCGCGAG TTGAGCGGAG AGGCGTGA
 
Protein sequence
MTTSPTNEIA SDVVAFWVGA GPQKWYVQDD AFDQEIRDQF GQVWRAAQDG HLPDWASDAD 
GALALVILLD QFPRNMFRND PRAFATDDKA LVVTGDCLAH GWDREVAEPE RQFIYMPLMH
SENMDHQDRC VELMKARMSE GNNELHARAH REIIARFGRF PFRNAALSRE TTAEEQDFLD
NGGYRAIVRE LSGEA