| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1717 |
|---|
| Symbol | queA |
|---|
| ID | 3934165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1700998 |
|---|
| End bp | 1702065 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637904068 |
|---|
| Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
|---|
| Protein accession | YP_509659 |
|---|
| Protein GI | 89054208 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
|---|
| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.242555 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG ATGATTTCGA CTTCGATCTG CCCGACGGGT TGATTGCCAC GCGCCCCGCG
CGGCCCCGAT CCTCGGCCAG ATTGCTGGTG GCCGACGGGC CGGAGACCCA TGATCTGACC
GTGGCGGATC TGCCCTCCAT GCTGCGGCGC GGGGACCGGT TGGTCCTGAA TGACACCCGC
GTGATCCCCG CGCGGCTGAC CGGCACGCGC ACCCGAATGT CCGCGCAGGG AGAGGTGACG
GCCCGGATCG AAGTCACCCT GATGGAGCCG CAGGCCGATG GCACCTGGTC CGCGCTTGCC
AAGCCGATGC GGAAGCTGAA AGCGGGAGAG AAAATAATAT TCTCCAATGC TTTGCAAGCT
GATGTTCATG CGATGGATGA AGGATTGCGC CTGGCCTTCA ATGTCGAAGG CGACGATTTT
GACGCGGCGC TGAACGCCGC AGGTGCCATG CCGCTTCCGC CCTATATTGC GGGCAAGCGG
GCCCCCGATG CGCGCGACTA TCACGACTAT CAGACCATCT GGGCCAAACG CGCCGGCGCC
GTAGCCGCGC CCACCGCCAG CCTGCATTTC GACGAACACC TGATGGACGC CCTGACATCT
CGTGGTGTTG ATGTCACCTT TGTCACGCTG CATGTCGGTG CGGGCACCTT CCTGCCTGTC
ACGGTCGACG ACGTCACCAC CCACAAGATG CATGCCGAAT GGGGTGAGGT CCGCGCGACA
GCCGCCGCCG AGATCAACGC CACCAAGGCC GCCGGGGGGC GCATCATTCC CGTTGGCACC
ACGGCCCTGC GGCTGATCGA ATCCGCCGCC CAAGACGGCA CAATCCACCC CTTTGAGGGC
ACGACCGATA TTTTCATCTA TCCCGGCTAT CGCTGGCAGA TCACCGACGC GCTGATGACC
AACTTTCACC TGCCCAAATC GACGCTGCTG ATGCTGGTCT CCGCGCTGAT GGGCAAGGAC
CGGATGGACG CCGTCTACGC CCATGCCATC GCCAACCAGT ATCGGTTTTT TTCCTATGGT
GACGCGTCTT TGCTCTTTCC GTCGCAAAAG GGCCAGACGT CGCGGTGA
|
|---|
| Protein sequence | MKLDDFDFDL PDGLIATRPA RPRSSARLLV ADGPETHDLT VADLPSMLRR GDRLVLNDTR
VIPARLTGTR TRMSAQGEVT ARIEVTLMEP QADGTWSALA KPMRKLKAGE KIIFSNALQA
DVHAMDEGLR LAFNVEGDDF DAALNAAGAM PLPPYIAGKR APDARDYHDY QTIWAKRAGA
VAAPTASLHF DEHLMDALTS RGVDVTFVTL HVGAGTFLPV TVDDVTTHKM HAEWGEVRAT
AAAEINATKA AGGRIIPVGT TALRLIESAA QDGTIHPFEG TTDIFIYPGY RWQITDALMT
NFHLPKSTLL MLVSALMGKD RMDAVYAHAI ANQYRFFSYG DASLLFPSQK GQTSR
|
|---|
| |