Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1708 |
Symbol | |
ID | 3934156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1690670 |
End bp | 1691125 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637904059 |
Product | hypothetical protein |
Protein accession | YP_509650 |
Protein GI | 89054199 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000851441 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.864982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCA TGATTTTTCT GGCCGGGGCC GCAATGGCCG CGAGCTACTT CGTCACCTGG GTGGAACCGC CCTTCGCGGG GCAGGAGATC TCGCCCTCGG TCCTGATCGG CACCGATTTG CAGGCGATTA TCACCGACGG GACCTGGCAG GCGCGGGTCT TTGTGGGGGG CTTTGTCCTG GCGGCGCTCT GCGCGTTGCT GGGGGCGCTG GGGCGCACGG CGGGGCTGGT CGCGCTTCTG GCCGGGGCAT CGCCGGTGGT TCTTCTGGTC CATTACTACC TGCGGGCCGA GGATGTTCAG GCCGATCTGG GCCTGCCATT TTCGGTGAAT TTTCAGGATC TTGGGCAGGT CTATGAGCTG CTTGGCGACT TCCTGCGCGC AGGTCTGTGG ATGTATGCAG GCGGCGCGGC GGTTCTGCTG TTGGCGGGGA TGAGTGTCAC CTTCGGCAGG CGGTAG
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Protein sequence | MRFMIFLAGA AMAASYFVTW VEPPFAGQEI SPSVLIGTDL QAIITDGTWQ ARVFVGGFVL AALCALLGAL GRTAGLVALL AGASPVVLLV HYYLRAEDVQ ADLGLPFSVN FQDLGQVYEL LGDFLRAGLW MYAGGAAVLL LAGMSVTFGR R
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