Gene Jann_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1708 
Symbol 
ID3934156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1690670 
End bp1691125 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content65% 
IMG OID637904059 
Producthypothetical protein 
Protein accessionYP_509650 
Protein GI89054199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000851441 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.864982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCA TGATTTTTCT GGCCGGGGCC GCAATGGCCG CGAGCTACTT CGTCACCTGG 
GTGGAACCGC CCTTCGCGGG GCAGGAGATC TCGCCCTCGG TCCTGATCGG CACCGATTTG
CAGGCGATTA TCACCGACGG GACCTGGCAG GCGCGGGTCT TTGTGGGGGG CTTTGTCCTG
GCGGCGCTCT GCGCGTTGCT GGGGGCGCTG GGGCGCACGG CGGGGCTGGT CGCGCTTCTG
GCCGGGGCAT CGCCGGTGGT TCTTCTGGTC CATTACTACC TGCGGGCCGA GGATGTTCAG
GCCGATCTGG GCCTGCCATT TTCGGTGAAT TTTCAGGATC TTGGGCAGGT CTATGAGCTG
CTTGGCGACT TCCTGCGCGC AGGTCTGTGG ATGTATGCAG GCGGCGCGGC GGTTCTGCTG
TTGGCGGGGA TGAGTGTCAC CTTCGGCAGG CGGTAG
 
Protein sequence
MRFMIFLAGA AMAASYFVTW VEPPFAGQEI SPSVLIGTDL QAIITDGTWQ ARVFVGGFVL 
AALCALLGAL GRTAGLVALL AGASPVVLLV HYYLRAEDVQ ADLGLPFSVN FQDLGQVYEL
LGDFLRAGLW MYAGGAAVLL LAGMSVTFGR R