| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1700 |
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| Symbol | |
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| ID | 3934148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1682637 |
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| End bp | 1684652 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637904051 |
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| Product | transketolase |
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| Protein accession | YP_509642 |
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| Protein GI | 89054191 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.117388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA AAGCCCTTGC AAGCGCCAAC CCCGATCACT GGGCCCGTGC CGCCTGCATC
CGCACCCTGA CGCTGGACGC CGTGGCCGCC GCCAATTCCG GCCATTCCGG CATGCCGATG
GGCATGGCCG ATGTGGCGAC TGTACTGTTT GACAAACACC TGAGCTTTGA CGCCTCCAAC
CCCGACTGGC CCAACCGCGA CCGCTTCATC CTGTCGGCGG GTCACGGGTC GATGCTGATC
TACAGCCTTC TGCACCTGAC CGGTTACAAG GACATGACGC TGGAGCAGAT CAAGAATTTC
CGCCAATTGG GCGCGATCAC GGCGGGTCAC CCGGAATATG GCCATGTGAA GGGCGTTGAG
ACGACGACCG GTCCCCTGGG CCAAGGCATT GCCAACGCTG TGGGTTTCGC CATGGCAGAA
GAGCATCTGC GCGCCAAATG GGGCAAGAAG ATCATCGACC ATTATACCTA CTGCATCGCC
GGCGACGGCT GCCTGATGGA AGGGATCAGC CAGGAGGCGC TGGCGCTGGC CGGGCACCAG
GAATTGTCGC GGCTGATCGT CATGTGGGAC AACAACAACA TCACCATCGA CGGCGAGGTC
TCCCTATCCG ACCGCACGGA TCAGATGGCG CGCTTTGCGG CCAGCGGCTG GGACGTGTTC
AGCTGCGACG GCCATGACCC CGCCGACATT GACCGCGCCC TGACCGAGGC CAAGGCGTCC
CCCGGCCCCG CGATGATCGC CTGCAAGACC CACATTGCCA TCGGCTCCAG CGCCCAGGAT
ACCGGCAAGG GCCACGGCGC GCTGACCGAT GACAAGCTGA TTGCCGACAC CAAAGAGGCC
TATGGCTGGC CCCATGCGCC GTTTGATATC CCCAAGGATC TGAAATCCTG GTGGGAAGGT
GTGGGGTCCA AAGGGGCCGA GGCGCGCCAG GCCTGGGAAG AGCAATTCGA TGCCATGTCC
GCAGGCAAGC GCGCCGAGTT CAACCGCACC TTTGCGGGCG AAATGCCCAA GAAGCTGTCG
GCCACGATCA AGGCGTTCAA GAAACAACTC TCGGACGAGA AGCCCAAGGT CGCGACCCGC
AAGGCCAGCC AGATGGCGCT GGAGGTGATC AACACGGTGG TGCCGGAAAC CCTTGGCGGA
TCAGCGGACC TGACCGGGTC CAACCTGACC AATACCGGCG GTCTGGGGAC CTTCGCGCCC
GACGACCGCA AGGGCCGCCA CATCCATTAC GGCATTCGCG AACACGCCAT GGCGGCGGCG
ATGAATGGGA TGATCCTGCA TGGCGGCGTG AAGCCCTATG GCGGCACCTT CTTCACCTTC
ACCGACTATG CGCGGCCGTC CATGCGGCTG GCCGCGCTGA TGAAAATCGC GCCGGTCTAT
GTGATGACCC ACGACAGCAT CGGCGTGGGC GAGGATGGCC CGACGCACCA GCCGGTCGAA
CACCTCGCCA TGTTGCGCGC CACGCCCAAC ATGAACGTCT TCCGCCCCGC AGATGCGGTC
GAAACGGCGG AGGCGTGGGA GCTGGCCCTG ACATCGACGG ACACGCCATC GACCCTCGCC
CTGTCGCGTC AGGGGCTGCC GCTTCTGCGC ACAGAGCACA AGACCAAGAA CCTCACGGCC
CAGGGCGGCT ACGTGCTGGC CGATGCGGAG GGCAAGCGCC AGGCGATCCT GATGGCCACG
GGCTCCGAGG TTGCCATCGC CATGGCCGCC CGCGATCTGT TGCAGGCGGA GGGGATCGGC
ACGCGCGTCG TGTCCCTGCC CTGCTGGGAA TTGTTCGAGG CGCAGGACGA GGCCTACCGC
AAGCGGGTCT TGCCCGGTGG CCCGGTCCGC GTCGCCGTGG AGGCCGCGAT CCGCTTCGGC
TGGGACCGGT GGCTGTACGG AGAGCGTGGC AAGCGCGACA AGGGCGGCTT CGTGGGCATG
CATGATTTCG GCGCATCCGC CCCGGCGGAG GATCTGTACA CGCATTTCGG CATCACAGCC
GAAGATGTGG CTGCCAAGGT GAAATCCCTG CTGTAG
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| Protein sequence | MDIKALASAN PDHWARAACI RTLTLDAVAA ANSGHSGMPM GMADVATVLF DKHLSFDASN
PDWPNRDRFI LSAGHGSMLI YSLLHLTGYK DMTLEQIKNF RQLGAITAGH PEYGHVKGVE
TTTGPLGQGI ANAVGFAMAE EHLRAKWGKK IIDHYTYCIA GDGCLMEGIS QEALALAGHQ
ELSRLIVMWD NNNITIDGEV SLSDRTDQMA RFAASGWDVF SCDGHDPADI DRALTEAKAS
PGPAMIACKT HIAIGSSAQD TGKGHGALTD DKLIADTKEA YGWPHAPFDI PKDLKSWWEG
VGSKGAEARQ AWEEQFDAMS AGKRAEFNRT FAGEMPKKLS ATIKAFKKQL SDEKPKVATR
KASQMALEVI NTVVPETLGG SADLTGSNLT NTGGLGTFAP DDRKGRHIHY GIREHAMAAA
MNGMILHGGV KPYGGTFFTF TDYARPSMRL AALMKIAPVY VMTHDSIGVG EDGPTHQPVE
HLAMLRATPN MNVFRPADAV ETAEAWELAL TSTDTPSTLA LSRQGLPLLR TEHKTKNLTA
QGGYVLADAE GKRQAILMAT GSEVAIAMAA RDLLQAEGIG TRVVSLPCWE LFEAQDEAYR
KRVLPGGPVR VAVEAAIRFG WDRWLYGERG KRDKGGFVGM HDFGASAPAE DLYTHFGITA
EDVAAKVKSL L
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