Gene Jann_1699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1699 
Symbol 
ID3934147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1681373 
End bp1682341 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content63% 
IMG OID637904050 
Producthypothetical protein 
Protein accessionYP_509641 
Protein GI89054190 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.776311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAC TTCTGGCCCT GTTGGACGAT GTGGCGGCGA TTGCAAAGGT GGCGGCCGCC 
TCCGTCGATG ACGTGATCGG ACAGGCGGCG AAGGCCGGTG CAAAGGCGGC AGGTGCTGTG
ATCGACGACG CCGCCGTGAC GCCCAAATAT GTCCACGGGT TTGAGGCCAA GCGCGAACTT
CCCATCGTCT GGAAGATCGC CCGCGCCTCC ATCTTCAACA AGCTGGTGAT CCTGCTGCCC
ATTGCCCTTT TGCTGAGCAC ATTCGCCCCC TGGATGATTC CGCCGCTCCT GATGTTGGGC
GGGGCGTATT TGTGTTTTGA GGGCGCGGAG AAGATCCACC ATTGGCTGAA GCCGCACCAC
GATGAAGTGG AGGAACTGGC CAAGAAGAAG ATGTCCGCCG AGGACACCGC GCATCTGGAA
GAGCAGAAGG TCAAAGGCGC GATCAAGACC GACTTCATCC TGTCGGCTGA GATCATGACC
ATCGCGCTGG CGGCCCTGGA AACCGACAAT ATCTGGTTCC GGGGCGCGGC GCTGGCCGTT
GTGGCCGTGG GCATCACGGT GCTTGTCTAC GGCGCGGTCG CGCTGATCGT GAAGGCCGAT
GATGTGGGGC TGCATATGGC CTCCAACGGG CGTCTCGACA CCACCCAGAA AGTCGGCGAG
CTGATCGTGC GCGGGATGCC GACGTTCCTG AAATGGCTGA CGATTGTGGG CACGGCGGCG
ATGCTCTGGG TCGGCGGCTC GATCATCGTC CACGGGTTGG CCGAGATGGG CTGGCACGGG
CCCGAGGATT GGATTGACGG CGTCGCCCAC GCCGTTGGCG GCGAGAGCGG CCTGATCGTC
TGGCTGGTGA AAGCGGCCAT TGACGGTGTG CTCGGAATTG TCGTGGGCAT GCTGATCATC
CCGGTCGTGA CCTATATCCT CGTGCCCGCC ATGCGCGCGA TGGGGCTTGG CGGTAACGCG
GCGCATTAA
 
Protein sequence
MSGLLALLDD VAAIAKVAAA SVDDVIGQAA KAGAKAAGAV IDDAAVTPKY VHGFEAKREL 
PIVWKIARAS IFNKLVILLP IALLLSTFAP WMIPPLLMLG GAYLCFEGAE KIHHWLKPHH
DEVEELAKKK MSAEDTAHLE EQKVKGAIKT DFILSAEIMT IALAALETDN IWFRGAALAV
VAVGITVLVY GAVALIVKAD DVGLHMASNG RLDTTQKVGE LIVRGMPTFL KWLTIVGTAA
MLWVGGSIIV HGLAEMGWHG PEDWIDGVAH AVGGESGLIV WLVKAAIDGV LGIVVGMLII
PVVTYILVPA MRAMGLGGNA AH