Gene Jann_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1679 
Symbol 
ID3934127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1663954 
End bp1664328 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content62% 
IMG OID637904030 
Producthistidine triad (HIT) protein 
Protein accessionYP_509621 
Protein GI89054170 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTG ACTACGACGA CCAGAATATT TTCGCGAAGA TCCTGCGCGG CGAGATCCCC 
AACACGACGT TGGCCGAGAC CGCGCATACC CTGGCATTTG CGGATCTGTA CCCGCAGGCA
CCGGTCCATG TGCTGGTGAT CCCCAAGGGG CCTTACGTCT GCTTTGATCA CTTCGCGGCA
GAGGCGTCAG ACGCGGAAAT CGCGGATTTT CACCGGGTGG CCGCGCAGGT CTGTGCCGAA
ATATCCCCGG GCGCGGGCGG GGCGGGGTAT CGCACCATCT CCAACGCGGG CGAAGACGGC
GTGCAGGACG TGCCGCATTA TCACATGCAT ATCCTCGCCG GACGCCCCCT GGGACGGATG
CTGGCAAAAG CCTGA
 
Protein sequence
MAFDYDDQNI FAKILRGEIP NTTLAETAHT LAFADLYPQA PVHVLVIPKG PYVCFDHFAA 
EASDAEIADF HRVAAQVCAE ISPGAGGAGY RTISNAGEDG VQDVPHYHMH ILAGRPLGRM
LAKA