| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1665 |
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| Symbol | |
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| ID | 3934113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1649217 |
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| End bp | 1650437 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637904016 |
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| Product | mandelate racemase/muconate lactonizing enzyme |
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| Protein accession | YP_509607 |
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| Protein GI | 89054156 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0687285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG ACACTTTGGA CATCTTCGCC GTCGCTCCCC CGCCCCCCGG CTGGGGCGGG
CGCTATTGGC TGCTCGTCCG CGTCACTACC GACACCGGCC TCACGGGCCT GGGTGAAGTC
TATGCCGCGG GCGTCGGGCC GGAGGCGATG ACACATGTCA TCCACGACGT CTTCACCCGC
CACATGCGCG GTGAAGACCC GGCCAATATC GAACTGATGT CGCGCCGGGC CCACTCCTCC
GGCTTCACGC AGCGCCCTGA TCCCACGGTG TTCGGCGCGT TCTCAGGCCT TGAAATGGCC
TGCTGGGATA TCCTCGGCAA GGCGCGGGAT TGCCCGGTCT GGGCGATGCT CGGCGGCAAG
ATGAACGACC GCATCCGCGC CTACACCTAC CTCTATCCCG AACCTCACCA CGACACGAAC
GCCTTCTGGA CATCGCCCGA AATGGCCGCG GAAAGCGCCG CCGCCCGTGT GGCGGAAGGG
TACACAGCGG TGAAATTCGA CCCCGCTGGC CCCTACACAA TGCGCGGGGG CCATATGCCC
GCGCTCAGCG ACATTGACCT GTCGGCGCGG TTTTGTGCGG CGATCCGGGA CGCGGTGGGC
ACCCAGGCTG ACCTCCTTTT CGGCACCCAT GGTCAGTTTG CGCCTGCTGG CGCGATCCGC
CTTGCCAAGG CCATCGAGCC CTATGATCCG CTTTGGTATG AAGAGCCCAT TCCGCCCGAT
AACCTCCCCG GTCTGTCCGA GGTCGCGGCC CATACCTCGA TCCCCATCGC CACCGGCGAA
CGGCTGACGG GCGTGACCGA ATTCACCCAA GCGCTGCACC ACGGCGCGCG GATCCTGCAA
CCGGCCCTTG GGCGCGCGGG CGGGATATGG GAGGGCAAGA AAATCGCCAC CCTGGCCGCC
GCCTTTGGCG CGCAGCTGGC CCCGCACCTT TACGCCGGTC CTGTCGAATG GGCCGCGAAT
GTGCATCTGG GCGTAAGTTG TCCGAACCTG TTGATGGTGG AGGCGATTGA GACGCCTTTC
CACGAGGCCC TCGTCACCGG ACGGCCCAGG GTGGAAAACG GCTTCGTTGC AGCTCCCGAC
GCGCCGGGGC TTGGCATCAC ACTGAACGAC GCGATCGCAA ACGCGCATCG CTACACCGGG
AACCGGCTGC ATCTGGAGAT GCAGGACGCA CCGTGCGATT GGCAGAACGG AAATTCCTTC
GGCGGCGGAG CCGTCGACTA A
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| Protein sequence | MKLDTLDIFA VAPPPPGWGG RYWLLVRVTT DTGLTGLGEV YAAGVGPEAM THVIHDVFTR
HMRGEDPANI ELMSRRAHSS GFTQRPDPTV FGAFSGLEMA CWDILGKARD CPVWAMLGGK
MNDRIRAYTY LYPEPHHDTN AFWTSPEMAA ESAAARVAEG YTAVKFDPAG PYTMRGGHMP
ALSDIDLSAR FCAAIRDAVG TQADLLFGTH GQFAPAGAIR LAKAIEPYDP LWYEEPIPPD
NLPGLSEVAA HTSIPIATGE RLTGVTEFTQ ALHHGARILQ PALGRAGGIW EGKKIATLAA
AFGAQLAPHL YAGPVEWAAN VHLGVSCPNL LMVEAIETPF HEALVTGRPR VENGFVAAPD
APGLGITLND AIANAHRYTG NRLHLEMQDA PCDWQNGNSF GGGAVD
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