| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1660 |
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| Symbol | |
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| ID | 3934108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1643489 |
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| End bp | 1644463 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637904011 |
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| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
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| Protein accession | YP_509602 |
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| Protein GI | 89054151 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0211382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACGA TTGACGATAT CGAAGCCTCC GCCAGCCGGG CCGAGGGTGT TGTCCGGCGT
ACGCCGTTGC TGTCGTCGCC CTTCATTGAC GAGATCGCTG GGCGTCGCGT GCTCCTGAAG
GCCGAGGTTT TGCAGCATAC CGGGTCGTTC AAGTTTCGCG GCGGGTGGTC TGCGTTAACG
GCGTTAACCA AGGACGCGCG CGGGGTGATC GCCTATTCCT CGGGCAACCA CGCGCAGGGG
GTGGCGCGGG CGGCCGAGAT TTTGGGCGTG CCCGCGACGA TCCTGATGCC CGCCGATGCG
CCCGCGTTGA AAATCGCCAA CACTCGCGCC ATGGGAGCCG ATGTGGTGCT CTATGATCGC
GCGGGCGGAG AGGACCGGGC CGAGATTGGC GCGCGGTTGA GCGAGGAACG GGGACTGACG
CTGGTGAAAC CCTACGACGA TCCGAAGGTG ATGGCCGGGC AGGGTACTTG CGGGCTGGAG
ATTGCGGAGC AGGCTTTGGC AGCGGGGGTG GCGGAGGCGA CGGTTTTGAC GTGCTGTGGT
GGGGGTGGTT TGACCTCTGG CATTTCCACG GCGCTGGAGG CGAAGGCCCC GAGCCTGCGG
GTGCGCCCGG TGGAGCCCGA GGGGTTCGAC GACGCCACGC GGTCGCTGGC GGCGGGCGAA
ATCCTGTCCA ATGCGGGCGC GGAGGTGGGC TTGTGCGATG CGGTGCTGAC GCCCGCACCC
GGGCGGCTGA CCTTCCCGGT GATGCAGCGG CTTTGTGGGC CGGGGATTGT TGTCACGGAG
CGCCAGGTGA AATCGGCCAT GGCGGTGGCG GCGAGCCGGT TGAAACTGGT GGTGGAACCC
GGTGGAGCCG TGGCCTTGGC CGCGGCGCTC TACCATGGCG ATGCGTTGGC CGACGGACCG
GTTATTGCGA CGCTGTCGGG GGGGAATGTG GACCTGGGAG TATTCGCGCA GATCGTGGCG
GAGGCCGAGG GCTAG
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| Protein sequence | MITIDDIEAS ASRAEGVVRR TPLLSSPFID EIAGRRVLLK AEVLQHTGSF KFRGGWSALT
ALTKDARGVI AYSSGNHAQG VARAAEILGV PATILMPADA PALKIANTRA MGADVVLYDR
AGGEDRAEIG ARLSEERGLT LVKPYDDPKV MAGQGTCGLE IAEQALAAGV AEATVLTCCG
GGGLTSGIST ALEAKAPSLR VRPVEPEGFD DATRSLAAGE ILSNAGAEVG LCDAVLTPAP
GRLTFPVMQR LCGPGIVVTE RQVKSAMAVA ASRLKLVVEP GGAVALAAAL YHGDALADGP
VIATLSGGNV DLGVFAQIVA EAEG
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