| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1658 |
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| Symbol | |
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| ID | 3934106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1641969 |
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| End bp | 1642655 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637904009 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_509600 |
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| Protein GI | 89054149 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00863248 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.745098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAA TGACCACATG TGTGTTTGAT GCTTATGGCA CGCTCTTTGA TGTCGCCGCG
GCGGCCCGCG AATTGGCGGA GCGGCCCGGG CGGGAGGCGT TTGCGGAGGT CTGGCAGCAG
GTGGCGAATG ACTGGCGACT GAAGCAGTTG CAGTATTCGT GGCTGCGGGC CGTGGCGCGG
GACCATTGCG ATTTCTGGAG TGTCACCGGT GATGGCTTGG ATTGGGCGCT GGAGAGGGCG
GGGCTGGCGG ATATGGAACT GCGCGAAGAG TTGATGGGGC TGTATTTCAC TCTGTCCGCC
TATCCGGAGG TGCCGGAGAT GTTGGGCCGC CTCAAGGCTG CGGGGCTGCA GACGGGGATC
TTGTCCAACG GCTCGCCAGA TATGCTGCGC GGTGCGGTGG AAAGCGCGGG CCTGAGCGAC
CTGCTGGATG CCGTGTTGAG TGTGGAGGAT GTGGGCGTCT TCAAGCCCGA CATGCGGGTC
TACGACATGA TCGGGCAGCG GTTCGGCTGC GCGCCGGGCG ACGTTCTGTT CGTGTCGGCC
AATGGCTGGG ACGCGGCGTT CGGGGCGGCC TATGGGTTCG ACACGCTCTG GGTGAACCGG
GGCGGGGAGC CGATGGATCG GCTGACGGGC AAACCGGGGC GCGAGGCGCG CGATCTGACC
GGCGTGGCCG CGCTTGTGGG GGCGTGA
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| Protein sequence | MTKMTTCVFD AYGTLFDVAA AARELAERPG REAFAEVWQQ VANDWRLKQL QYSWLRAVAR
DHCDFWSVTG DGLDWALERA GLADMELREE LMGLYFTLSA YPEVPEMLGR LKAAGLQTGI
LSNGSPDMLR GAVESAGLSD LLDAVLSVED VGVFKPDMRV YDMIGQRFGC APGDVLFVSA
NGWDAAFGAA YGFDTLWVNR GGEPMDRLTG KPGREARDLT GVAALVGA
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