Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1646 |
Symbol | |
ID | 3934094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1628382 |
End bp | 1632833 |
Gene Length | 4452 bp |
Protein Length | 1483 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637903997 |
Product | hypothetical protein |
Protein accession | YP_509588 |
Protein GI | 89054137 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.734787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCC TTCTCCTTTC AGCCGCAGGT GCCGCAGCGG GTGGCCTGAT CTCGACGCCC ATTCTTGGTA TGTCCGGGGC GGTCCTGGGC CGCGCCATCG GTGCGACCAT CGGGCGGGTC ATTGATCAAC GCCTCATGGG AACCGGATCG GAACCGGTCG AGGTGGGGCA GACAGACCGG TTGCGTATCA CAGGCGCCGG AGAAGGTGCC CCTATTGCAC AGCTCTACGG GCGCATGCGC TTGGGGGGGC ACGTCATCTG GTCCACGCAG TTTCTGGAGC GGAAGACCAC CACAGGCGGC AGCGGCAAGG GCGCGCGTCC GCAACCGACC CCGCAAACGA CGACGTATTC TTATAGCATA AGCCTGGCCA TTGCGCTTTG TGAAGGCGAG ATCGCCCGGG TTGGTCGGAT CTGGGCCGAT GGGGTGGAAA TTAACCGCGA ATCCATCACG TGGCGGCTCT ACAAGGGCAG TCAGACACAG ATGCCTGACC CGCTTTTGGA GGCGGTCGAG GGGGCGGGCG CGGTCCCGGC CTATCGTGGC ACCGCATATG TGGTGCTGGA GGACCTGGAC CTGTCACCCT ATGGCAACCG GGTGCCGCAG TTCGCTTTCG AGGTGGTGCG CCCTGCGCAA CCCGACCTTC CCCATGTGCC CAGTGCCGCT GAGGCTGTGC GTGCCGTGGC GCTGATGCCG GGCACGGGGG AATACGCCCT GGCCACGACC GCAGTAAGCC GAAAGTACGG TTTGGCGCTT GGCACATCAG CGAATGTCAG CGCCGAGGGG GGTGTGACGG ATTTCGCGCA ATCGCTCGGG CAATTGCGCG ATACGCTGCC CAACCTGGAG TCGGTCTCTC TGATCTATTC ATGGTTCGGT GATGATTTGC GCACGAGCCG GTGCAAGGTG CGCCCAAAGG TGGAGCAGCG TGAGTTCGAT GGTGTCGAGA TGCCATGGAC TGCGGGCGGC ATAACACGCG GTCAGGCACA GGCGATTGCG CAAGTGGATG GACGCCCGAT CTATGGGGGC ACGCCCGCCG ACCGATCCGT GCTGGAGGCA ATTGCGGCGA TCCATGCCGG TGGCCAGAAG GTCACCTTCT ATCCGTTTTT GCTGATGGAG CAATTGGCGG GGAACGGGCT TCCCGACCCT TACGGCGGGG CAGAGCAGGC GCCGTTGCCA TGGCGGGGCC GGATGACCGG AGACCTTGCG CCCGGGCAGG CGGGATCACC GGATGGGACG GCGGCCAACC GGGCTGCTGT GGCCGCGTTT TTTGGCAGCG CAATGGCCTC GGATTTCAGC ACCGGAATCG GAGGCGTCCA ATACTCCGGG CCGCAGGATT GGAGCTACAG CCGCTTCATC CTGCACTGCG CCGCGTTGTG TCGGCAGGCG GGGGGCGTGG AGGCCTTTTG CATCGGGTCC GAGATGCGCG GACTGACCCA GATGCGAGAT GATTTCGGAT TCCCGGCCGT GGATGCCTAC ATCGCACTGG CGGCACAGGT GCGCGCGCTT CTGCCCACGG CCAAGATCAC CTATGCCGCT GATTGGTCGG AATATTACGG GTATCAGCCG CAGGACGGAT CTGGTGACCT ATATTTCCAC CTCGATCCAC TTTGGGCAGA CCACAACATC GATGTCATCG CGATCGACAA CTACATGCCG CTCAGCGACT GGCGCGATGG AGCGGAGCAT CTGGACTACG ACAACGGTCC GATCCATGCG CTCGATCACC TGAAATCCGG CATCGAGGGT GGTGAGGGCT ATGACTGGTA TTATCCCGAT CCGGAAGCCA GGGCCACGCA ACAGCGCGCG CCGATCACGG ACGGGAATGG TGCGCCGTGG GTTTACCGTT TCAAGGACCT GCGCAATTGG TGGCAAAACA ACCATGTTGA GCGGCGCGGC GGCGTTCCGC TTGGCCAGTT GAATGTGGTC GGGCCAACCT TTGACGCAAC CCACGCCACC GGGACCTACT GGCTGGACGG CCACACCTAC GCAACATCCG CTCTGGCCGG GGCGAGCACC GCCCAAAGTG CCGTGTCCGT TGAGCGAATC GACGTTTCCG GTGAAGGTTG GGTATTGCAG GCCAGCGATG ATGATCGAAC CATATCCGAG CGGTCCGCGC GGGCGTTTGT TCCGGGGCAG CTGATCCGCG TGACCCTGCG CACCCGTTTG CTTGCTGAGC CCGCGGACGG TCAGCCGCAT CGGCATGTTG TCTCGCTGAC CTCCCATCTG GCGGACGGCA GCTTTGATGG ACTGCGCTCT GTCGCGTTTT GGGAGGGGCT GACCGTCGCC GACGGGTGGG TCGAGCGGGT CGTGGAGTTT CGCCCGTCTG ATCTGCTCGG CGACGGCCAG ATTTCGCAGA ACGCAGCATC CTGGCGTCTA GCGCTGGGGC TGAATGGAGC GACGCCGCAT TCTGCCGCTG GGGCGATCCA GCAGATCTCT TCGATCAGGA TTGAGGACGC AAACGTCAAG ACGGCGTGGG TGCCGCAGTC CAAACCGATC TGGTTCACCG AGTTTGGTTG CGCGGCCATC GACAAGGGCA CCAATCAGCC CAACAAATTC CTCGATCCCA AATCCTCAGA AAGCAGCCTC CCGCACTTTT CGAACGGGCG GCGGGACGAT TTGATCCAGG CGCAATATCT GCGCGCCACA ATGGACTATT GGGCGGAACC TGGGAGAAAT CCGCAATCCA ATCAATATAA TGGGCCGATG TTGGATATGG GCCGGGCCCA TGCCTGGGCG TGGGACGCGA GGATGTGGCC CGCCTTTCCC AACGACTTGG CGAAGTGGAG CGATGGCACA AACTGGCTGC GCGGCCACTG GGTCACGGGG CGCCTCGACG GGCAACCGCT TGATCTGGTT GTCGCCGACA TTTGCGAAGT GGCGGGGATC ACGGACTACG ATGTCTCGTC ACTGTTCGGT CTGGTGCGGG GCCATGTGTC GGCCCAGACC CAAAGCGCGC GGGCCAGATT GCAACCGCTT ATGCTCGCCT ATGGCTTTCA GGCGGTAGAG CGGGACGGAA AGCTGGTCTT CCTTCCGGCG CCCGAGAGAC CGCAGCAGAT CATCGAAGCG CCCCTGACGG CACGGGACGA TGATGGGGAG GGCGGCTTCA CCCATGTTCG CGCCCCGGAT GCCGAGACCG TGGGCCGCTT GCGCATCGGA TATACCGAGG CTGAGGGTGC ATATGTCAGC AAGGTGGCAG AGGCGATTTT CCCCGGGGAT GGCGCCGATC AGGTCAATGA CGTGGACCTT CCGCTGGCCC TGACATCAGC CGAAGGTCAG GGCATGGCCG AGCGCTGGTT GGCGGAGGGC CGCGTGGCAC AGGACACGCT GCGCTTTGCG TTGCCACCCT CCGAGCGGGC GCTGGGCGCG GGAGCGGTTA TCGAAACGGA AGACGGGCAT ACATGGCGGA TTGATCGGGT GGAAGATCGC GGCTTCCGGC AGATAGAGGC GGTTCGCATC GCCTCGTCAG CCTATGTCCC ATCGGAAGAC GTCGACGATA TGCCAATTGT CGAGGCGTTC GTGCCCCCGT TGCCGGTCAC GCCCATTTTC CTGGATCTGC CGCTTCTGAC GGGAGATGAG GTGGAGCACG CCCCGCATCT GGCTGTGGCG GCCGACCCTT GGCCGGGTGC TGCGGCGGTC TATTCCGCTC CGGGTCCCGA TGGGTTCACC CCGAATACGT TGGTGGAACA GCCCGCGATC GCTGGGACGC TCATGCAACC CATGTCCGCG CAACCGCCGG GGATCTGGGA CCGCTCGGGC AAGATCCAGA TCCGGCTGGA AACGGGTAGC CTGTCGTCGG TGGACCGCGC GACGGTTTTG TCCGGGGCCA ATGCGGCGGC CATCGGATCG GGCGACGACG ACCTCTGGGA AGTGATACAA TTCGCCGACG CGACACTGGT GGGACCCGAT ACTTGGGAAA TCGGCTTGCG TCTACGTGGC CAGCAGGGAA CCGACGCGGT GATCCCGGAG GTCTGGCCGA CGGGCAGCCT GTTCGTGCTT CTCGACAGCG CGGTGGGACA AGTTGAACTG CCAAGTTCGA CCAGAGGGTT GGAGCGCTAC TGGCGCGTCG GCTCGTCCCG CCGACCGGTG GACGACGCCA CCTATGTCGA AAAGGTGTTG GCTTTCCAAG GTATTGGGTT GCGGCCCTAC AGCCCGGTGC ACCTGCGCGC GCCCCGAGCG GTTGCCGGTC GTGGCATCCG CTGGATCCGC CGCTCGCGGA TTGATGCGGA TACCTGGGAT GGCCCGGACG TGCCTTTGGG TGAGGCGTCC GAGCAGTACA TCCTGCGTGT TCAAGACGGC ACGGCGCTGC GGCGCGAGGT TCTGCTGAGC ACGCCCATGT TCACCTACAC CGATGCGATG CGCGCCAGCG ATGGCACGCT GAGCGACTAT TTCATCGAGG TTGCTCAAGT CTCCGAACGG TTCGGAGCGG GGCCATTTGC AAGGATTCAG ATCAATGACT GA
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Protein sequence | MATLLLSAAG AAAGGLISTP ILGMSGAVLG RAIGATIGRV IDQRLMGTGS EPVEVGQTDR LRITGAGEGA PIAQLYGRMR LGGHVIWSTQ FLERKTTTGG SGKGARPQPT PQTTTYSYSI SLAIALCEGE IARVGRIWAD GVEINRESIT WRLYKGSQTQ MPDPLLEAVE GAGAVPAYRG TAYVVLEDLD LSPYGNRVPQ FAFEVVRPAQ PDLPHVPSAA EAVRAVALMP GTGEYALATT AVSRKYGLAL GTSANVSAEG GVTDFAQSLG QLRDTLPNLE SVSLIYSWFG DDLRTSRCKV RPKVEQREFD GVEMPWTAGG ITRGQAQAIA QVDGRPIYGG TPADRSVLEA IAAIHAGGQK VTFYPFLLME QLAGNGLPDP YGGAEQAPLP WRGRMTGDLA PGQAGSPDGT AANRAAVAAF FGSAMASDFS TGIGGVQYSG PQDWSYSRFI LHCAALCRQA GGVEAFCIGS EMRGLTQMRD DFGFPAVDAY IALAAQVRAL LPTAKITYAA DWSEYYGYQP QDGSGDLYFH LDPLWADHNI DVIAIDNYMP LSDWRDGAEH LDYDNGPIHA LDHLKSGIEG GEGYDWYYPD PEARATQQRA PITDGNGAPW VYRFKDLRNW WQNNHVERRG GVPLGQLNVV GPTFDATHAT GTYWLDGHTY ATSALAGAST AQSAVSVERI DVSGEGWVLQ ASDDDRTISE RSARAFVPGQ LIRVTLRTRL LAEPADGQPH RHVVSLTSHL ADGSFDGLRS VAFWEGLTVA DGWVERVVEF RPSDLLGDGQ ISQNAASWRL ALGLNGATPH SAAGAIQQIS SIRIEDANVK TAWVPQSKPI WFTEFGCAAI DKGTNQPNKF LDPKSSESSL PHFSNGRRDD LIQAQYLRAT MDYWAEPGRN PQSNQYNGPM LDMGRAHAWA WDARMWPAFP NDLAKWSDGT NWLRGHWVTG RLDGQPLDLV VADICEVAGI TDYDVSSLFG LVRGHVSAQT QSARARLQPL MLAYGFQAVE RDGKLVFLPA PERPQQIIEA PLTARDDDGE GGFTHVRAPD AETVGRLRIG YTEAEGAYVS KVAEAIFPGD GADQVNDVDL PLALTSAEGQ GMAERWLAEG RVAQDTLRFA LPPSERALGA GAVIETEDGH TWRIDRVEDR GFRQIEAVRI ASSAYVPSED VDDMPIVEAF VPPLPVTPIF LDLPLLTGDE VEHAPHLAVA ADPWPGAAAV YSAPGPDGFT PNTLVEQPAI AGTLMQPMSA QPPGIWDRSG KIQIRLETGS LSSVDRATVL SGANAAAIGS GDDDLWEVIQ FADATLVGPD TWEIGLRLRG QQGTDAVIPE VWPTGSLFVL LDSAVGQVEL PSSTRGLERY WRVGSSRRPV DDATYVEKVL AFQGIGLRPY SPVHLRAPRA VAGRGIRWIR RSRIDADTWD GPDVPLGEAS EQYILRVQDG TALRREVLLS TPMFTYTDAM RASDGTLSDY FIEVAQVSER FGAGPFARIQ IND
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