Gene Jann_1643 details

Gene Information

• Locus tag: Jann_1643
• ID: 3934091
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 1626442
• End bp: 1627074
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637903994
• Product: hypothetical protein
• Protein accession: YP_509585
• Protein GI: 89054134
• COG category: [S] Function unknown
• COG ID: [COG5448] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR02217] conserved hypothetical protein TIGR02217

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.86743
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGATTTC ATGAAGTTCG TTTCCCCACC AAACTCAGCT TCGGGTCCAT GGGTGGGCCT 
GAGCGTCGCA CCGAGGTCGT GGCGCTGACC AACGGGTTCG AGGAGCGCAA CACGCCCTGG 
GCCCATTCCC GCAGGCGCTA TGATGCGGGC ATTTCCATGC GCTCGCTCGA TGATATCGCG 
CTGGTGGTCG ACTTTTTCGA AGCGCGTCGG GGCCAGCTTT ATGGCTTCCG CTGGAAGGAT 
TGGTCTGATT TCAAATCCTG CGCCCCGTCT GCCGATCCGG GTTTTCAGGA TCAGGTGATT 
GGCACAGGTG ATGGCGTGAC GCTGACGTTT CAGCTGCGCA AGACCTATCA ATCCGGCGTC 
AACTCCTACG CGCGCCCCCT GACGAAGCCT GTGGAGGCGA CCGTATTGGT TGGCGTGTCC 
GTGATCGAGC AGGTCGAAGG GACGGACTTC ACGGTCAATT ACACGACGGG CGAGATCACC 
TTCGCGACCG CACCCCCCAA CGGCGTCGAG GTGACAGCGG GCTATGAGTT CGACGTCCCA 
GTGCGTTTTG ATACGGATAT GATCCAGACC TCCATGGCGA CGTTTCAAGC GGGCGAGATG 
CCCGACGTGC CTGTTGTGGA GATCCGGGTA TGA 

 

Protein sequence

MGFHEVRFPT KLSFGSMGGP ERRTEVVALT NGFEERNTPW AHSRRRYDAG ISMRSLDDIA 
LVVDFFEARR GQLYGFRWKD WSDFKSCAPS ADPGFQDQVI GTGDGVTLTF QLRKTYQSGV 
NSYARPLTKP VEATVLVGVS VIEQVEGTDF TVNYTTGEIT FATAPPNGVE VTAGYEFDVP 
VRFDTDMIQT SMATFQAGEM PDVPVVEIRV