| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1635 |
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| Symbol | |
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| ID | 3934083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1622120 |
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| End bp | 1623301 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637903986 |
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| Product | phage major capsid protein, HK97 |
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| Protein accession | YP_509577 |
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| Protein GI | 89054126 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.304591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.904057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA CCCAGGACCG GGGCGCGAGC AGCGTACCCA TGGCTGAAGT CAAGACCGCG
ATCGGCGGAT TCTTGAGTGA GTTCAACCAA TTCCAAGACG ACATGAATGC AAAATTTCAA
AAGCAGGAAG ACCGTATCGC TATGCTCAAC ACGAAAACAA ACACGTTTCA ACGCCCCGCA
TTGTCGGCGG ATGTCGACAC CACCGCCCCC CACAAGCTGG CGCTGAAATC CTATCTTCGC
TGTGGCGATG ATGATGCGCT TCGCGGCCTG GAACTGGAAG GCAAGGCGAT GAACACCGCC
GTCAATGCCG AAGGTGGCTA TCTGGTCGAT CCGCAGACGT CCGAGATGAT CCAGTCGGTC
CTACGCTCCT CGTCCTCCCT GCGCTCGGTC GCCAATGTGG TGACGGTTGA AGCGACGTCC
TTTGACGTGC TGATCGACAG CACCGATACC GGCGCCGGTT GGGCCGATGA GGTGTCCAAC
ACGACCGAGA CCGACACGCC CACCATTGAG CGCATCTCCA TCGCGCTGCA CGAGCTGTCG
GCGCTGCCCA AAGCGTCCCA GCGTCTTCTG GACGACGCGG CATTTGACAT CGAAGGCTGG
CTGGCCGGTC GCATCGCCGA CAAGTTCGCC CGCGCCGAGG CCGCGTCCTT CATCACCGGT
GACGGCTCTG GCAAGCCCAC GGGCATGCTC ACCCACCCCA CCGTGGACAA CGACAGCTGG
TCTTGGGGCA ATCTGGGCTA TGTCGCGACT GGCACCGCGG GCGATTTCGA CAATACCAAC
GCCGCCGATG CAATTGTCGA TCTGGTCTAT GCACTGGGTG CACGCTACCG CGCCAACGCC
AACTTCATCA TGAACTCCAA GACCGCCGGT GCGGTGCGGA AGATGAAAGA CGCGGACGGC
CGCTTCCTGT GGTCCGATGG TCTGGCCGCC GGTGAGCCCG CGCGTCTTAT GGGCTACCCC
GTTCTGATCG CCGAGGATAT GCCCGACATC GCAACCGATG CGATGGCGAT TGCCTTCGGT
GATTTCGGCG CCGGCTACAC CATCGCCGAG CGTCCGGATC TGCGTGTGTT GCGTGACCCG
TTCTCGGCCA AGCCGCATGT CCTGTTCTAT GCCACGAAGC GTGTTGGCGG TGACGTCACC
GATTTCGCAG CGATCAAACT GATGAAGTTC GGCACGTCCT GA
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| Protein sequence | MTETQDRGAS SVPMAEVKTA IGGFLSEFNQ FQDDMNAKFQ KQEDRIAMLN TKTNTFQRPA
LSADVDTTAP HKLALKSYLR CGDDDALRGL ELEGKAMNTA VNAEGGYLVD PQTSEMIQSV
LRSSSSLRSV ANVVTVEATS FDVLIDSTDT GAGWADEVSN TTETDTPTIE RISIALHELS
ALPKASQRLL DDAAFDIEGW LAGRIADKFA RAEAASFITG DGSGKPTGML THPTVDNDSW
SWGNLGYVAT GTAGDFDNTN AADAIVDLVY ALGARYRANA NFIMNSKTAG AVRKMKDADG
RFLWSDGLAA GEPARLMGYP VLIAEDMPDI ATDAMAIAFG DFGAGYTIAE RPDLRVLRDP
FSAKPHVLFY ATKRVGGDVT DFAAIKLMKF GTS
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