Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1621 |
Symbol | rpsR |
ID | 3934069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1609552 |
End bp | 1609779 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637903972 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_509563 |
Protein GI | 89054112 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0249871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCAA AACCATTCTT CCGCCGCCGC AAGACCGACC CGTTTGAGGG CGAGAACGCG CCGAAGATCG ACTATAAAGA CACCCGCCTC CTGCAACGCT ACATTTCCGA GCGTGGCAAG ATCGTCCCCT CCCGTATCAC CGCTGTCGGT GCCAAGAACC AGCGTGCGCT CGCCAAGGCG ATCAAACGCG CGCGGTTCCT GGCCCTGCTG CCCTACGCCG TCAAATAA
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Protein sequence | MAAKPFFRRR KTDPFEGENA PKIDYKDTRL LQRYISERGK IVPSRITAVG AKNQRALAKA IKRARFLALL PYAVK
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