Gene Jann_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1600 
Symbol 
ID3934048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1582838 
End bp1583668 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content69% 
IMG OID637903951 
Producthypothetical protein 
Protein accessionYP_509542 
Protein GI89054091 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.768763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.425979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGT CCCAACGACA CGAGGCCTTC GCGCGCCTTC ACCAGAGTGG GTGTTTCGTG 
ATGCCCAACC CCTGGGATCG CGGCTCGGCC CGGATGATGG CGGCGTCGGG TGCTTTGGCG
CTGGCCACGA CCTCGTCGGG TCACGCGTTC ACGCTGGGAC GCGCGGATAT GGGCGGGGTG
GACCGCGATG AGGCACTGGC CCACGCCCAG GACATCCTCA GCGCCACCGC GCTGCCGGTC
TCGGGCGATT TCGAGAACGG CTTCGGCGAT GATCCAGACA CGGTGGCCGA GACGATCCGC
ATGGCGGCGG AGGTCGGCCT CTCGGGCTGC GGGATCGAGG ATATGGCGTT TGAAGGCGGG
CTGCGCGCTT ATGACTTTGA CCTGAGCGTC GAGCGAATCA AAGCGGCGGT GGCGGCGGTT
CAAAGCCTTG GGCGGCCCTT CGTGCTGACG GCCCGCGCCG ATGGGGTGAT GAACGGGCTC
TACGATCTGG ACGAGGGGAT TGCCCGGCTG AAGGCGTTTG AGGCGGCGGG CGCGGAGTGT
CTGTACCTGC CGGTCCCGCC GGGGCGCGCC GAATTGGCGC GGGTGCTGGC GGCGGTGAGC
GCCCCGGTCA ACGTGTTGGC GGCGGGCGCG TTGCGCGATC TGCCGGTGGG CGATCTGGCC
GCCATGGGCG TGCGCCGCGT GTCCCTGGGC GGGCAGGTGG CGCGTGTGAC GCACGCCGCC
ATCCGCGACG CGATGGCGGG CGTGATGGCC GGGGATCTGA CGGCGCTGAA AGGCAGTGCT
TCCGGGGATG AGATTGATGC CATGCTGGGG AAGGGTGCCG GAGATGACTG A
 
Protein sequence
MTLSQRHEAF ARLHQSGCFV MPNPWDRGSA RMMAASGALA LATTSSGHAF TLGRADMGGV 
DRDEALAHAQ DILSATALPV SGDFENGFGD DPDTVAETIR MAAEVGLSGC GIEDMAFEGG
LRAYDFDLSV ERIKAAVAAV QSLGRPFVLT ARADGVMNGL YDLDEGIARL KAFEAAGAEC
LYLPVPPGRA ELARVLAAVS APVNVLAAGA LRDLPVGDLA AMGVRRVSLG GQVARVTHAA
IRDAMAGVMA GDLTALKGSA SGDEIDAMLG KGAGDD