Gene Jann_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1590 
Symbol 
ID3934038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1571569 
End bp1571979 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content64% 
IMG OID637903941 
Producthypothetical protein 
Protein accessionYP_509532 
Protein GI89054081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.17101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA TCCGCCGCCT TTGCCTGGTC TACGCCGTTG TTCTTCTCGC CGTGGCCGCG 
ATCAACTATG TCCCCATCCC CGGCATGGTG GATGAGAATG GGCTGGCCTT CGGGATCTTT
GCCCTCGACC CGTTTGACGA TGCCCTGCAC CTCGTCTCGG CCATATGGGC GTTCCTGGCC
GGGCTGATCT CCAACCGCAC GGCCCGCAGC TTCCTGATCC TGTTCGGTGC GGCCTACCTC
GCCGATGGCA TCTTCGGCAT CTTCACCGGG TGGGGCTTTC TCGACTTCGC GATCTTCACC
AACGAGAGCC TGGGCTTTGA GCTGTCGTTC CAACGCATCA TGGCCAACCT GCCCCATATC
GGCCTTGGCG CGATCGCGCT GGCCGGAGGC GTGGCGGCGC GCCGGGCATG A
 
Protein sequence
MSLIRRLCLV YAVVLLAVAA INYVPIPGMV DENGLAFGIF ALDPFDDALH LVSAIWAFLA 
GLISNRTARS FLILFGAAYL ADGIFGIFTG WGFLDFAIFT NESLGFELSF QRIMANLPHI
GLGAIALAGG VAARRA