| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1562 |
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| Symbol | |
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| ID | 3934010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1537748 |
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| End bp | 1538764 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903913 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_509504 |
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| Protein GI | 89054053 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTGA AAAAAGCGGA TATCTTCAGT GTATCAAAGG CCGCGCGGGT GTCGCCTTCG
ACCGTGTCGC GCTACTTCAA CCACCCTGAA CTGGTCAAAC TCGCGACCCG CAAGAAGATA
GATGCTGCCG TCCGTAAACA GGGCTACATC CGCAACCGCG CGGCCCAGAC GATCCATGGC
ATTCGCTCCG GCACAATCGG CGTTGTCGTC CCCACGCTGG ACCACGCGAT CTTTGCAGAG
GTTGTGCAGG CCTTCTCCGA CACGGTGGCG GACTTGGGGT TCACGATCCT CCTGGCCTCC
CACGGCTACG ACCAGCAGCG GGAATACGCG ATCCTGCGCA AAATGCTGGA GCATCGGGTG
GATGGCGTGG TGCTGACCGG CCTGGACCAT GATGACGCGG TGTTTCAACT GATCGAGGGG
CAGGACGTGC CTTTGGCGCT GATGTGGAAC TATTCCGAAG GCGCGCCCTA CCCCTGCATC
GGGGCCGACA ATGACCTTGC GGGCCGGATG ATCGCGCAGC ATGTCTTGGC GTTGGGCCAC
ACGCAGATCG CCTGCATGTT TCCACCCACC GGCGGCAATG ACCGGGCCGA GGCGCGGCGC
AATTCGGTGA TGGAAACCCT TGCGGAGGCG GTCGTGGATG TGCCTGACCG CTGGCAACTG
ACCACCGTTT ACAGCGTCTC TTCCTCCAAA CGCGAGACGA TGGCGCTGTT GCGCGCAGGA
CCCCATCCCA CCGCGTTGAT CTGCGGCAAT GACGTGCTGG CGACCGGAGC ACTTTACGGG
TCAGCCGCGA TGGGCATCTC GGTGCCGCGC GACCTGACAA TCGTGGGCAT CGGCGATTTT
CGTGGCGCCG CCGAGATTGA GCCTGCCTTG ACCACAGTCC ATATCCCGGC ACGTGAGATT
GGTCGGGAAA GCGGCAAGGC ACTGGCCGCT GCTATCACGG ATCCGGATGA GCCGCGCCAT
AATATCCATT GTAGACCCAG CCTGCGCGTG CGGGCCTCGT GCCGCGCCCT TGCGTAG
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| Protein sequence | MKVKKADIFS VSKAARVSPS TVSRYFNHPE LVKLATRKKI DAAVRKQGYI RNRAAQTIHG
IRSGTIGVVV PTLDHAIFAE VVQAFSDTVA DLGFTILLAS HGYDQQREYA ILRKMLEHRV
DGVVLTGLDH DDAVFQLIEG QDVPLALMWN YSEGAPYPCI GADNDLAGRM IAQHVLALGH
TQIACMFPPT GGNDRAEARR NSVMETLAEA VVDVPDRWQL TTVYSVSSSK RETMALLRAG
PHPTALICGN DVLATGALYG SAAMGISVPR DLTIVGIGDF RGAAEIEPAL TTVHIPAREI
GRESGKALAA AITDPDEPRH NIHCRPSLRV RASCRALA
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