| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1545 |
|---|
| Symbol | |
|---|
| ID | 3933993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1516274 |
|---|
| End bp | 1516528 |
|---|
| Gene Length | 255 bp |
|---|
| Protein Length | 84 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637903896 |
|---|
| Product | conjugal transfer TraD |
|---|
| Protein accession | YP_509487 |
|---|
| Protein GI | 89054036 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.358728 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.298058 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCT GGCAAGTCGA GCGGCGCAAA CGCACGCGGC ATCTGATCGA ACTTGGAGGC
CTCGTCGTCA AAGCCGGGAT CGTGGAACTG ACCCGCGATG ACCGCGTCCT AATCCACGGC
GCGCTCCTGT GGATGGCTGA CCGACTTGAG GGCGAGAAGG GCGAGATTTC GCAAAAGGTC
TGGCGGAGCT GGGGGCGAGC GGCATTCGAG ATGGAACATG TCGAGAAAGC GGCGAAGGGG
AGAAACTCTA TCTAG
|
|---|
| Protein sequence | MRTWQVERRK RTRHLIELGG LVVKAGIVEL TRDDRVLIHG ALLWMADRLE GEKGEISQKV
WRSWGRAAFE MEHVEKAAKG RNSI
|
|---|
| |