| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1542 |
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| Symbol | |
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| ID | 3933990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1512410 |
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| End bp | 1512640 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637903893 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_509484 |
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| Protein GI | 89054033 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.417665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCACC CAGACCGCAT CGTTCGCCTC ACAACCGTCC TCGACCGCAC CGGCCTGTCC
CGATCCACCC TCTACCGCAA AATCGCAGAA GGGACCTTTC CCGCGCAGCT CCGGATCAGC
GTTCATGGCG CAGGCTGGCG GGAGTCTGAG ATTGGCGAAT GGATCGACAA TCCGGCAGGG
TGGAGGCCTC AAAACTCAAC CGTAGAAACG CTCAAAAAGC GTGAGCACTA A
|
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| Protein sequence | MSHPDRIVRL TTVLDRTGLS RSTLYRKIAE GTFPAQLRIS VHGAGWRESE IGEWIDNPAG
WRPQNSTVET LKKREH
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