Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1534 |
Symbol | |
ID | 3933982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1504756 |
End bp | 1505916 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637903885 |
Product | response regulator receiver domain-containing protein |
Protein accession | YP_509476 |
Protein GI | 89054025 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00802449 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.276837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGAGT TCCTGATTAT AGAAGATGAA GCGGAAAAGC GGTCATCAAT CGAAAATGAG ATACGTGCAT ACTTTGGCGA TCCAGGCATC CAGTTTTGCG TTGCTCAGAC ATTTGCTGAG GCTGCCAAAC TAATCTTCGA ACGGCGTTTT GACCTTATTG TAACAGACTT GATGCTACCG CGACGAAAGG GTGATGAGCC GTCCGACTTT TCAGACAATC TTCTAGATTT CTTGAGCAGC AGTTCTTTAA ATTCTAGCGC AGTCGTTGTC GCAATTTCGC AATTTGGTGA CTTGATCGAA AGACAAGCTA CAAGCTTCAA GCGCCTTGGT ATTTTTCTGC TTGACTACAA TAACCAGTCA GATTGGCGGA CGTGTTTGAA AGTCTGCTTG CAACGAGTTG AACACAAACA AACAGTTGAT TTTGCCATCA TATGTGCTCT TGAAGAAGAG CGAGTGGGTT TTCGAGAAGT CGAAGGCGAT GCGACGTTTG GTGAGCTCTC ACGGTACCAC GGTTTGGATT GTCGAGACAT ATCCATCGCA GGTTTCAATG GAATTTGTGT TGTCCAGCCG CGTATGGGCT TAGTCGACGC TGCTGCAATC TGCTCTCAGA TCCTTTCACT GTTTCGCCCC AGACTAATAT GCATGGCAGG CATTTGTGCT GGGTTTGAGG GCGAAGTTGA ACTTGGAACC TTATTGGTTT CTGACCCATC TTGGGAACAT CAATCTGGAA AATGGAAGGG CGAAGATTTC AAGTTGTCGC ACTATCAAGA GCCCTTGCAA AACAGCGTTC GAACGATACT CAGCCAGGTC ATTGAAGAGG ACCCCACCTG CCAGAGTCTG ACTTCCGACC TACCTGAATT ATATCGCTCG TTGGAACGAG CAGCTGCAAT CATGCCAACA GTCTCGGGTT CTGCGGTAAT CGCATCAAGT GATAAGGCAA GTGAAATCAG GGAACAGCAT CGCAAAGTAG GAGGCCTAGA TATGGAAGTT TATGGGCTGT ATCGCGCCGC GGCTATTCAT TCTGATAGCA TAAGCTGCTT TGCGGCGAAG ACCGTCGTTG ACCTTGCGAA CGAAGCAAAG GGCGATGACC TGCACCATGC AGGTGCAGTT TTTTCTGCTC GTTTCGTCGC AAAGGCAATC CATCGAATTC TAAGTGATTG A
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Protein sequence | MAEFLIIEDE AEKRSSIENE IRAYFGDPGI QFCVAQTFAE AAKLIFERRF DLIVTDLMLP RRKGDEPSDF SDNLLDFLSS SSLNSSAVVV AISQFGDLIE RQATSFKRLG IFLLDYNNQS DWRTCLKVCL QRVEHKQTVD FAIICALEEE RVGFREVEGD ATFGELSRYH GLDCRDISIA GFNGICVVQP RMGLVDAAAI CSQILSLFRP RLICMAGICA GFEGEVELGT LLVSDPSWEH QSGKWKGEDF KLSHYQEPLQ NSVRTILSQV IEEDPTCQSL TSDLPELYRS LERAAAIMPT VSGSAVIASS DKASEIREQH RKVGGLDMEV YGLYRAAAIH SDSISCFAAK TVVDLANEAK GDDLHHAGAV FSARFVAKAI HRILSD
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