| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1516 |
|---|
| Symbol | |
|---|
| ID | 3933963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1486105 |
|---|
| End bp | 1486443 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637903866 |
|---|
| Product | nitrogen regulatory protein P-II |
|---|
| Protein accession | YP_509458 |
|---|
| Protein GI | 89054007 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0347] Nitrogen regulatory protein PII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.14536 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TTGAAGCAAT CATCAAACCG TTCAAGCTGG ATGAGGTCAA AGAGGCCCTT
CAGGAAATCG GCATTCAGGG TCTCAGCGTG ACCGAGGTCA AGGGCTTTGG ACGCCAGAAG
GGCCACACCG AATTGTACCG CGGCGCGGAA TATGTCGTGG ATTTCCTCCC GAAAGTGAAG
ATCGAGGTCG TTCTGGCCGA CGATCTGACC GATGCCGCCA TCGAGACGAT CATCAACGCG
GCCAAGACCG ACAAGATCGG CGACGGCAAG ATCTTCGTCT CCGACGTCAG CCAGGCGATC
CGCATCCGAA CCGGCGAAGC GGGCGAAGAC GCGCTGTAA
|
|---|
| Protein sequence | MKKIEAIIKP FKLDEVKEAL QEIGIQGLSV TEVKGFGRQK GHTELYRGAE YVVDFLPKVK
IEVVLADDLT DAAIETIINA AKTDKIGDGK IFVSDVSQAI RIRTGEAGED AL
|
|---|
| |