Gene Jann_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1515 
Symbol 
ID3933962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1484641 
End bp1486047 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content60% 
IMG OID637903865 
ProductL-glutamine synthetase 
Protein accessionYP_509457 
Protein GI89054006 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.274657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG AGAGCTTTTT GAAAATGATG AAGGACGAGG ACGTCGAGTA CGTCGATGTT 
CGCTTCACCG ACCCACGCGG CAAGTTGCAG CACGTCACGC TGATGGCCGA CCAGGTTGAC
GAGGATTTCA TCGAAGAGGG CTTCATGTTC GACGGCTCCT CCATCGCCGG TTGGAAGGGC
ATTGAAGCCT CCGACATGAA GCTGATGCTG GACACGAACT CGGGCTATGT GGACCCCTTC
TACGCCGAAA AAACGCTCTG CGTGCATTGC TCGGTCGTGG AGCCCGACAC GGGCGAGGCC
TATGAGCGCG ACCCGCGCGG CACGGCGGAA AAGGCCGAAG CCTACCTGAT TTCCAGCGGC
ATCGGCGACA ATTTCTACTG CGGCCCCGAA GCGGAATTCT TCATCTTTGA CGATGTGCGG
ATGTCCGTTG AGATCAACAA GGTCTCCTAT GAGGTCGACG CGCAGGACGC CTCCTGGAAC
GGCGATACCG AATATGAGAT GGGCAATATG GGCCACCGCC CGGGCGTCAA AGGCGGCTAC
TTCCCCGTCA ACCCGATCGA CGCCTCCCAC GATCTGCGCT CGGAAATGCT GTCCACGATG
AAGCGCATCG GCATGAAGGT CGACAAGCAC CACCACGAGG TGGCGTCGTG CCAGCACGAG
CTGGGTCTGA TCTTTGACAG CCTCACCAAA CAGGCCGATG AGTTGCAGAA ATACAAATAC
GTGATCCACA ACGTGGCCCA CGCCTATGGC AAATCCGCCA CCTTCATGCC CAAGCCCATC
GCGGGCGACA ATGGCACCGG AATGCACGTG AACATGTCGA TCTGGAAGGA CGGCAAGCCC
TTGTTTGCAG GCGACAAATA CGCCGATCTG TCGGACGAGG CGCTGTATTT CATTGGGGGT
ATCCTGAAGC ACGCCAAGGC GCTGAACGCG TTCACGAACC CCTCCACCAA CTCCTACAAG
CGTCTGATCC CGGGCTTTGA GGCCCCGGTT CTGCGCGCGT ATTCTGCTCG CAACCGGTCG
GGCTGTGTGC GGATCCCGTG GACGGAAAGC CCCAAGGCCA AGCGTGTGGA AGCGCGCTTC
CCTGACCCGG CGGCGAACCC CTATCTGTGC TTCGCGGCGC TGTTGATGGC GGGCCTTGAC
GGTATCCAGA ACAAGATCCA CCCCGGCGAT CCGTCGGACA AGGATCTGTA CGATCTGCCG
CCGGAAGAAC TGGCCGGTAT CCCCACGGTC TGCGCCTCCC TGCGCGAAGC GCTGGACGAG
CTGGAAGCCG ATCACGAGTT CCTGCTGAAG GGCGACGTGT TCACCCGCAG TCAGATCGAA
GGCTACTGCG CGCTGAAGTG GGAAGAGGTC TATGCCTACG AGCACACGCC GCACCCGATG
GAATACAAGA TGTATTACAG CTGCTAA
 
Protein sequence
MSTESFLKMM KDEDVEYVDV RFTDPRGKLQ HVTLMADQVD EDFIEEGFMF DGSSIAGWKG 
IEASDMKLML DTNSGYVDPF YAEKTLCVHC SVVEPDTGEA YERDPRGTAE KAEAYLISSG
IGDNFYCGPE AEFFIFDDVR MSVEINKVSY EVDAQDASWN GDTEYEMGNM GHRPGVKGGY
FPVNPIDASH DLRSEMLSTM KRIGMKVDKH HHEVASCQHE LGLIFDSLTK QADELQKYKY
VIHNVAHAYG KSATFMPKPI AGDNGTGMHV NMSIWKDGKP LFAGDKYADL SDEALYFIGG
ILKHAKALNA FTNPSTNSYK RLIPGFEAPV LRAYSARNRS GCVRIPWTES PKAKRVEARF
PDPAANPYLC FAALLMAGLD GIQNKIHPGD PSDKDLYDLP PEELAGIPTV CASLREALDE
LEADHEFLLK GDVFTRSQIE GYCALKWEEV YAYEHTPHPM EYKMYYSC