| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1493 |
|---|
| Symbol | |
|---|
| ID | 3933940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1463934 |
|---|
| End bp | 1465379 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637903843 |
|---|
| Product | betaine aldehyde dehydrogenase |
|---|
| Protein accession | YP_509435 |
|---|
| Protein GI | 89053984 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.330699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCGA CTGCTTCCCA TTTCGTGAAC GGCGCGTATC TGGAAGATAC CGCTGGCACG
CCGATGCCCG TCATTTTCCC CGCCACGGGC GCGGAAATTG CGCGCGTCCA TGCAGCCACC
CCTGCTGTCG TTGAGGCCGC CCTGGCCTCC GCAAGATCCG CGCAGGTGGA ATGGGCCGCG
TTGATGGGCG TTGAGCGGGG CCGCATCCTG CGCCGTGCCG CCGACATCAT CCGCGAACGC
AACCGGGAGT TGAGCGAGCT GGAGACCCTG GATACCGGTA AACCGATTCA GGAAACGCTG
GTGGCCGACG CCACGTCGGC GGCGGATGCG CTGGAATATT TCGGTGGCAT CGCGGCCTCT
TTGGGCGGGG AGCACATGCA ATTGGGCGGC GATTGGGCCT ACACGATGCG CGTTCCCCTC
GGCGTCTGCG TCGGCATTGG CGCGTGGAAT TACCCCACCC AAATCGCCGC TTGGAAGGGT
GCGCCTGCCC TGGCCTGCGG CAACACGATG GTGTTCAAAC CTTCCGAGCA AACCCCGCTA
TGTGCTTTGA AAGTCGCGGA AATTCTGGTT GAAGCCGGCG CGCCCGCCGG TGTCTACAAC
GTCATCCAAG GCGCAGGAGA GGTGGGCCGC GCATTGGTCG AAGATCCGCG CACGGCCAAG
GTATCCCTCA CCGGATCGGC GGGCACGGGC AAGAAAGTCT ACGCCGCAGC GGCCGCACAA
ATGAAGCACG CAACGATGGA GTTGGGGGGC AAATCGCCAC TGATCATCTT CGACGATGCG
GATTTGGAAA GTGCCGTGTC CGGCGCGATC AACGCTAATT TCTACGCCTC TGGGCAGGTA
TGTTCCAACG GCACACGGGT GTTCGTGCAA TCCGGCATCA AGGATGCCTT CCTGACACGT
CTGACAGAGC GGACGGCGCA GGCCATCATC GGCGATCCCC GCGATGAGGC CACAAATTTC
GGCCCAATGG TGAGTGAAGA TCAGCTCGCA ATCACTTGTT CCTACATCGA AAAAGGTCTT
TCAGAGGGCG CGCGTCTGAT CCACGGCGGC AAACGACTGG ATCGGCCCGG CTGCTATATC
GAGCCGACCA TTTTCGCTGA TGTGACCGAC GATATGACCA TCGCCCGGGA AGAGATTTTT
GGCCCCGTCA TGTGTGTCCT GGACTTCGAG ACCGAAAATG ACGTCGTCAG CCGCGCAAAT
GCGACAGATC TGGGCTTGTC CGGTGCCGTT TTCACCGCCG ATCTGACCCG GGCGCACCGC
GTCGTCCATG CCATCGACGC CGGAAGCCTC TGGATTAACC AATATAACCT CACGCCAGTC
GAGGTGCCTT TTGGCGGCAT GAAGGGCTCA GGCATCGGGC GCGAGAACTC GCGCACCGCT
GTTGAGCATT ACAGCCAACT CAAGACTGTT TACGTCGGAA TGTCCCCTGT GGAGGCCGCA
TTCTGA
|
|---|
| Protein sequence | MQPTASHFVN GAYLEDTAGT PMPVIFPATG AEIARVHAAT PAVVEAALAS ARSAQVEWAA
LMGVERGRIL RRAADIIRER NRELSELETL DTGKPIQETL VADATSAADA LEYFGGIAAS
LGGEHMQLGG DWAYTMRVPL GVCVGIGAWN YPTQIAAWKG APALACGNTM VFKPSEQTPL
CALKVAEILV EAGAPAGVYN VIQGAGEVGR ALVEDPRTAK VSLTGSAGTG KKVYAAAAAQ
MKHATMELGG KSPLIIFDDA DLESAVSGAI NANFYASGQV CSNGTRVFVQ SGIKDAFLTR
LTERTAQAII GDPRDEATNF GPMVSEDQLA ITCSYIEKGL SEGARLIHGG KRLDRPGCYI
EPTIFADVTD DMTIAREEIF GPVMCVLDFE TENDVVSRAN ATDLGLSGAV FTADLTRAHR
VVHAIDAGSL WINQYNLTPV EVPFGGMKGS GIGRENSRTA VEHYSQLKTV YVGMSPVEAA
F
|
|---|
| |