Gene Jann_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1469 
Symbol 
ID3933916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1438911 
End bp1439924 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content62% 
IMG OID637903819 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_509411 
Protein GI89053960 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTT TGGTCGTCGG ATTGGGGAAC ATGGGCCAAA GCCACGCGCT GGCGCATCAC 
GCCGCCGACG GTGTTGAAAT TATTGGCCTC GTCAACCGGT CCAGCCGAGA TTTGCCCGGG
GCGCTACAGG GCTATCCGAT GATCCAGACG GTGGAGGAGG GGCTGGCCCT GTCCCCCGAC
CTTGTGGTCA TTGCTACCTA TTCGGACACC CACGCGGATC TTGCCTGCCA GGCCATGCGG
GCGGGTGCCC ACGTGTTTGT TGAAAAGCCT CTGGCGACCA CGGTTGCGGA TGCAAAGGGG
GTCGTGGAAA CGGCCCGGGA GACGGGCCAG AAACTGGTCG TCGGCTATAT CCTGCGCCAC
CATCCCAGCT GGATGCGCCT GATCGAGGAG GCGCGCGCTT TGGGCGGGCC CTACGTCTTC
CGCATGAACC TGAACCAGCA GTCAACGGGT GCGGAGTGGG CGACCCATAA GGCCCTGATG
CAAACGACAT CGCCTATCGT GGATTGCGGG GTGCATTACG TCGATGTCTG GTGCCAGATC
ACCGATGCCA GGCCGGTCGC TGTCCACGGC ATGGGCCTGC GCCTGAGCGA TGAGATCGCG
CCGGAGATGT ATAATTATGG ACAATTTCAG GTGTTTTTCG ACGACGGCTC CGTCGGGTGG
TACGAGGCGG GCTGGGGGCC GATGATGTCG GAGGTGGCGT TTTTCGTCAA AGATGTCATC
AGCCCCAATG GTGCGGTCTC CATCACCGAA GCCGACAAGG CGGGCAGCGC GGATATCGAC
GGACATACGA AAGTTGGCGG GGTGTTGGTC CATCGCCCCG GCGACGACCA GTTGATCGAA
TTTGAGGGCG AGCCGGGCCA TCAGGAGCTG TGCGATGCAG AGCAAGCCTT CATGCGGCGC
GCGATTGCCG AAGACCTCGA CCTGAGCCGT CATATGGAGG ATGCCGTGCG ATCGCTGGCG
ATCTGCCTGG CTGCCGATGA AAGCATCCGC ACGGGCCAGC GGGTCACGCT TTAG
 
Protein sequence
MRVLVVGLGN MGQSHALAHH AADGVEIIGL VNRSSRDLPG ALQGYPMIQT VEEGLALSPD 
LVVIATYSDT HADLACQAMR AGAHVFVEKP LATTVADAKG VVETARETGQ KLVVGYILRH
HPSWMRLIEE ARALGGPYVF RMNLNQQSTG AEWATHKALM QTTSPIVDCG VHYVDVWCQI
TDARPVAVHG MGLRLSDEIA PEMYNYGQFQ VFFDDGSVGW YEAGWGPMMS EVAFFVKDVI
SPNGAVSITE ADKAGSADID GHTKVGGVLV HRPGDDQLIE FEGEPGHQEL CDAEQAFMRR
AIAEDLDLSR HMEDAVRSLA ICLAADESIR TGQRVTL