| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1467 |
|---|
| Symbol | |
|---|
| ID | 3933914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1436714 |
|---|
| End bp | 1437787 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637903817 |
|---|
| Product | oxidoreductase-like |
|---|
| Protein accession | YP_509409 |
|---|
| Protein GI | 89053958 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.795298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTACA AGGTCGTCGG CATCAGTTTC GATCATATGC ACATGGGCGA TCTGCTGCGC
ATGGTGGACG CTCATCCGAA TGCGGAGATC ACGGCACTGT ACGACCCGGA CCGGGCGAAG
ATGGCCTCGG CTGCCAAGAC CTTCAACATC CCCGACGACG CCCTGTTCAC AGATTTTGAC
GCCTGCATGG CGGCGGGGCC TTATGATCTT GCCATCCTGT GTTGCGCCAC GGCGGATCAC
GCGGAGATGA CCGAGCGTCT TGCCCCCCAC GGCGTCCATA TCCACGTCGA AAAGCCCTTT
GCTGACAGTG CCGACAATGC CCGGAGGATG ATCCGCGCGA TGAAGGGAAC GGGAAAGATC
ATGTCGATCA ACTGGCCGCT GGCGTGGGTG GAATCGCACC TGACGGCCAA GCGCCTGATC
GATGAGGGGA TGATCGGAGA GTTACGTGAA GTGCATTTCT ACGACGGCAA TCGCGGCCCG
CTCTATCACC TCGCCGACAA GGTTGAGGTC TCACCGGAAG AGGTTGAGGC CCAGAAACCT
GATAGCTGGT GGTACAAGTC GGCCTCGGGC GGGGGCAGCC TGTTGGACTA CATGGGGTAC
GGCGCGACGC TTGGCACCTG GTACATGGGC GGTGAGGCCC CGCTAGAAGT CACATGTACC
ATTGACGAGA CGCCCGGGAT CGAGGTCGAC CAACACGCCA TCGCGGTCGT TCGATACGCG
CGCGGATTAA GCAAGATGGA GACGCGGTGG GGCACCTTTA CCGATCCGTG GAGCGTGAAC
CCGCAGCCGA CTTGCGGATT TGTGTTTGTG GGTCGCGACG GCACGATCAG CAGCCCTGAT
TACGCGCCTG CCGTCACAGT CCAGACCCGC GCACGGCCGG AAACGCACGA GATCCCCGTT
GATCCACTAC CTGAGGGTCG CGCGGACGCC ATCGCCTATA TCATTGATCT GATTGAGAGA
AATGCGGCGC CTGAGGGGCC GTTTGATCCG GCCCTGTGCC TGACCGCGCA ACGCATTGTG
GACACGGCCG CGGCCTCTGC CGCCGCCAAA CGCACCCTGG AGATCCTGCC ATGA
|
|---|
| Protein sequence | MTYKVVGISF DHMHMGDLLR MVDAHPNAEI TALYDPDRAK MASAAKTFNI PDDALFTDFD
ACMAAGPYDL AILCCATADH AEMTERLAPH GVHIHVEKPF ADSADNARRM IRAMKGTGKI
MSINWPLAWV ESHLTAKRLI DEGMIGELRE VHFYDGNRGP LYHLADKVEV SPEEVEAQKP
DSWWYKSASG GGSLLDYMGY GATLGTWYMG GEAPLEVTCT IDETPGIEVD QHAIAVVRYA
RGLSKMETRW GTFTDPWSVN PQPTCGFVFV GRDGTISSPD YAPAVTVQTR ARPETHEIPV
DPLPEGRADA IAYIIDLIER NAAPEGPFDP ALCLTAQRIV DTAAASAAAK RTLEILP
|
|---|
| |