| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1460 |
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| Symbol | |
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| ID | 3933907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1429291 |
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| End bp | 1429998 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903810 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_509402 |
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| Protein GI | 89053951 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAG CGGCGTTTCA GGACGCGGAC GTGCTTGTGG TGGGGGCCAG CCGTGGCGGG
ATTGGTACGG CGATTGCCCG TGCCTTTCGA GATGCCGGGG CGCAGGTGCG CATCACGGGC
GTCGAGGCTG CGCCTGACCC AGATGACGGG TTCGACTACA CGGCCCTCGA CGTGACGGAT
ACAGATGCCG TCCGCGCCTA TGCCGATACG ATCCAATACC TTGATATCCT GGTCAATTGT
GCCGCCATCA CGCGGCGTGG AGAGGAGATG GATCCCGGCT TTTTCTCCCA CGTACTGGAC
GTAAATTTAA CGGGATCGCT ACGGTGTGCG GAGGCTTTGC ACGATGCCTT GAAGGGCGGC
TGCGTCATCA ATGTGGCCTC AATGTACGCA CGCTTCGGCT CGCCCCGGAA CCCGGCCTAT
GGGGCGTCCA AGGCGGGGGT GGAGCAATTG ACCAAGTCGC TCGCCATCGC ATGGGCCGAG
GACGGCATCC GCGTCAACGC GATCGCGCCC GGCTTCATCG TAACGGAACA ATCGGCCCGC
GCGCGAGAAG ACGCGACTTT TGCTGAACGT GTGACGGCGC GAACCCCCAT GGGTCGGTGG
GGGCAACCCG ACGATATAGC GGGGGTCGCG CTGTTTCTGG CCAGTGACGC GGCCCGGTTC
GTCACGGGGG CCACGATCCC GGTCGACGGG GGATATTCGG TTGTTTGA
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| Protein sequence | MTSAAFQDAD VLVVGASRGG IGTAIARAFR DAGAQVRITG VEAAPDPDDG FDYTALDVTD
TDAVRAYADT IQYLDILVNC AAITRRGEEM DPGFFSHVLD VNLTGSLRCA EALHDALKGG
CVINVASMYA RFGSPRNPAY GASKAGVEQL TKSLAIAWAE DGIRVNAIAP GFIVTEQSAR
AREDATFAER VTARTPMGRW GQPDDIAGVA LFLASDAARF VTGATIPVDG GYSVV
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