| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1450 |
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| Symbol | |
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| ID | 3933897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1419203 |
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| End bp | 1420465 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903800 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_509392 |
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| Protein GI | 89053941 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCG TCATCTTCCT GACCAAGCTG CTGCTGGCGG TTCCGGTTGC CATCGTCCTG
TCGTTGACCG CGATCTGGTA CATCTGGGAG AGTGACAACA CGATCCTCTA TGAGAGCTTC
GCGCAGCGGA TGTTTTCCGG GATCGAAAGC TATGGCTTGC TCGCCATCCC GCTGTTCATG
CTGACCGGAG AGCTGATGAA CGAGGGCGGC ATGACCCGCC GTCTGATCAA CGCGGCGCGC
GTCTTCGTGG GCGGGTTTCG CGGGGGGCTG GCCTACATCA ATCTGTTGGC CAACATGTTC
ATGGCCGCCA TCGTCGGGTC CGCTGCCGCC CAGATCGCGG TGATGTCGCG CGCCATGGTC
CCCGCGATGG AAGAAGAAGG CTACGACCGC GGTTTCGCGG CGGCGACTAC GGCGGCCGGT
GGCCTGCTGG CCCCGGTGAT CCCGCCTTCA ATGCTGTTCG TGATCTACGG CGTCTTGGCA
CAGATCCCCA TCGGCAACAT GTTCCTGGCG GGCATCATCC CGGGCCTGAT CCTATCGGTC
TGCTTCGCGC TGGTGATCGC GCTGATCGGG CTGCGACAGC AGTTCCCCAA GGGGGAGTGG
ATGGCCGCGC GGGACGCCTG GAACGCGGTG CTTTATGCGC TGCCCGCGAT GCTGATCCCG
GCGGCGATCA TCGGGGGCAT CATCGGCGGC ATCGCGACGC CAACGGAATC CGCTGCCGTG
GCGAGCGTTG TGGCATTTCT GCTGGGATGG CTGCTCTATC GGGAATTGAA CCCAACGAAA
CTGTTTGAAA TGTTCAAGCG CACCGCGCTG AATGCGTCGC TGATCATCTT CATGATCGCG
GCCGCAAACG TCTTTGGCTG GGTCATTATC TATGAGGCGC TGCCGCAGCG GCTGGCCGAA
TTTATCACCA CGATCACCCA GAACCCGTTC GTGTTTTTGC TGATTGTAAA CCTCGTGTTG
CTGTTTGTGG GCATGCTGAT CGACGGCATC GCTGCGATCA TTCTGGTGAC GCCGATCCTG
TTGCCGATTG CCATCGACAG CTACGGGATC TCTCCCTACC AGTTCGGGGT CGTGATCTCG
CTGAACCTGG TGCTTGGCCT GCTGACCCCA CCGGTGGGCG TGGGCCTCTA CATCGCGTCG
GCCATGTCCG AGACGCCGAC GGGCCGGATC TTGAAGGCGC TTTGGCCGTT CCTGCTGGCG
GTCACGGCAG TGCTGATCCT GCTGAGCTAC GCGCCCGCGC TGTCGACGAT GTTGATAGAT
TGA
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| Protein sequence | MTPVIFLTKL LLAVPVAIVL SLTAIWYIWE SDNTILYESF AQRMFSGIES YGLLAIPLFM
LTGELMNEGG MTRRLINAAR VFVGGFRGGL AYINLLANMF MAAIVGSAAA QIAVMSRAMV
PAMEEEGYDR GFAAATTAAG GLLAPVIPPS MLFVIYGVLA QIPIGNMFLA GIIPGLILSV
CFALVIALIG LRQQFPKGEW MAARDAWNAV LYALPAMLIP AAIIGGIIGG IATPTESAAV
ASVVAFLLGW LLYRELNPTK LFEMFKRTAL NASLIIFMIA AANVFGWVII YEALPQRLAE
FITTITQNPF VFLLIVNLVL LFVGMLIDGI AAIILVTPIL LPIAIDSYGI SPYQFGVVIS
LNLVLGLLTP PVGVGLYIAS AMSETPTGRI LKALWPFLLA VTAVLILLSY APALSTMLID
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