| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1449 |
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| Symbol | |
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| ID | 3933896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1418658 |
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| End bp | 1419206 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903799 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_509391 |
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| Protein GI | 89053940 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.415474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCACC GCCTCTCCGC CGCTTGGGCG CGGGTCGAGA TGGCCACCGC TGCCCTTCTG
GCGGTCGCCG TGACCCTGCT GATCCTGCTC AACGTCGTGA CCCGCTCGAT GAACAACGCG
CTCTTCTGGG TCGATGAGAC GGCGATCTAC GCCATGGTCT GGATGACGTT TCTGGGCGCC
TCCGCCGCGA TCCAATCCCG CCAGCAGGTG GCGATCACGA TCCTGACCGA TGCGCTGCCG
GGCGGGGCGC GCCGCGTGGC CGCAAAACTG GTCGACGCGC TGGTCTTCGT CTTCGCCTGC
GCCATGCTCT ACTTTTGCTG GCGCTGGTAT CTGCCGCTGA CGATCATCGG CACCGGATTT
GACACGATGG CGTTCCAGGG CGCGACCTTC AATTTCATCT ATGCCGAACC CACCAGCACC
ATCGGCATCC AGAAGTGGAT CATCTGGCTG GTCATGCCCC TGTTTTCCTG TGGCGTCTTC
CTGCACGCGC TGGCCCATCT GATCGACCTC ACCCCGCCCG AGGCACGGCT GTCGGAGGTG
CAGGCATGA
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| Protein sequence | MLHRLSAAWA RVEMATAALL AVAVTLLILL NVVTRSMNNA LFWVDETAIY AMVWMTFLGA
SAAIQSRQQV AITILTDALP GGARRVAAKL VDALVFVFAC AMLYFCWRWY LPLTIIGTGF
DTMAFQGATF NFIYAEPTST IGIQKWIIWL VMPLFSCGVF LHALAHLIDL TPPEARLSEV
QA
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