| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1448 |
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| Symbol | |
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| ID | 3933895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1417601 |
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| End bp | 1418584 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903798 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_509390 |
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| Protein GI | 89053939 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.865561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAA TCAATGCATT AATGGCATCT GCCGCCGTGG CAATGACCGG TGTCGCGGGC
ACGCAGGCCG TGGCGGACGA CTTTCGTCTG GGCCTGATCA CGCCGCCCCC CCATGTCTGG
ACGTTGGCGG CGGGCGAGTT TGGCGAGGCG CTGGCCGAGG CCTCGGACGG GGCGCATTCC
GTGAGCATTT TCCCGGCCCG CCAGTTGGGC AACGAGGCGG AGATGTTGCA GCAATTGCAG
ACCGGCGCGC TGGACATGGC GTTCATGACG GTGGCCGAAG TGTCCAATCG CGCGCCCGAG
TTCGGCGCCT TCTACGCGCC CTATCTGGCC AACGACATGG CCCATGCAGC GGCGATCCTG
CGGTCCGATG AGGCGCGGGC TTTGCTGGAT CAACTGCCCG CCACGGTGGG CGTTGTCGGC
GTGGGCTATG GTTCTGCGGG TATGCGGCAG ATCCTGACCA ATGGGGGTGC AGACAGCGCG
GCAGACCTTG CCGGTCAGAA GATCCGCATC ACGCCATTTG AACCCATTCT GGACTTCTAC
AATGCGTTCG GCGTCGCCCC CACGCCCATG CCTTTGCCCG CCGTCTTCGA CGCGCTGGCC
AACGGGCAGG TCGACGGGAT CGACATGGAC GCCGAGCTGA TCGTGCTGCT GAACTACCAC
GAGCATGCCG ATACGATGAT CCAGACCAAC CACATGATGT TCCCGATGGT GGGCCTTGTG
TCGGGGCGCG TCTGGGCGGG CTTGACCGCG GAAGATCAGG CGATGATTTC CGAGTTGATG
GCGGCGGCTG TGGACAGCAC GCTGGACGTC TATGTGGAGC GGGACGGCCC GTGGCTGGAA
GAGATCGAGG CCACCGGCAT CAGCTATCAG GTTGCCGGGC CAGAGTTCTT TGGCGATGCC
ATTGAGACAT GGGAAGCCGC CTGGACGGAA CGTGCCGGAG ATGCGCTGGC AGCCTTGCGC
TCTGCTGCGG CAGAATTAGA ATAA
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| Protein sequence | MKTINALMAS AAVAMTGVAG TQAVADDFRL GLITPPPHVW TLAAGEFGEA LAEASDGAHS
VSIFPARQLG NEAEMLQQLQ TGALDMAFMT VAEVSNRAPE FGAFYAPYLA NDMAHAAAIL
RSDEARALLD QLPATVGVVG VGYGSAGMRQ ILTNGGADSA ADLAGQKIRI TPFEPILDFY
NAFGVAPTPM PLPAVFDALA NGQVDGIDMD AELIVLLNYH EHADTMIQTN HMMFPMVGLV
SGRVWAGLTA EDQAMISELM AAAVDSTLDV YVERDGPWLE EIEATGISYQ VAGPEFFGDA
IETWEAAWTE RAGDALAALR SAAAELE
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