| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1427 |
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| Symbol | |
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| ID | 3933874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1397040 |
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| End bp | 1397840 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903777 |
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| Product | ABC transporter related |
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| Protein accession | YP_509369 |
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| Protein GI | 89053918 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000710187 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.752355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACG CATCCAATAT GTCGCCGTCC GGCAGCGGGC CGATCGTCCA AATGGTCGAT
ATCAAGAAAC ATTTCGGTCC GGTGATCGCG CTCAACGGCG TGTCGTTCGA TGTGAAGGCC
GGCGAATGCC ACTGCCTTCT GGGCGATAAC GGTGCGGGGA AATCGACGTT CATCAAGACG
ATGTCCGGCG TGCACAAGCC CACCGACGGC ACCATCCTGT TTGAGGGGCG GGAGATGAAC
TTCGCCTCCC CCCGCGACAG CATGGAGGCC GGAATTGCCA CCGTGTATCA GGACCTTGCG
ATGATCCCGC TGATGAGCGT GACGCGCAAT TTCTGGATGG GCCGCGAGCC GGTGAAGCGC
TTTGGCATGA TCGATTTCGA GAAGGCCAAT TCCACCACCA TGGCCGAGAT GAAGAAGATG
GGGATCAACC TGCGGTCGCC GGATCAGGCG GTGGGCACGC TGTCGGGCGG GGAGCGGCAG
ACGGTGGCCA TCGCGCGCGC GGTCTATTTT GGCGCGAAGG TGCTGATCCT GGATGAGCCG
ACGAGCGCTT TGGGCGTGCG GCAGACGTCG AACGTGCTGG CCACCGTGGA TAGGGTGCGC
AGGGACGGCA TCGGCGTCGT CTTCATCACC CACAACGTGC GCCATGCGCT GGCGGTGGGC
GACCGGTTCA CGGTGCTGAA CCGGGGCAAG ACCCTCGGCA CAGCCCAGAA GGGGGAGATC
ACGCCGGAAG AGCTGCAGGA CCTGATGGCC GGTGGTCAGG AGATGGCGCA GCTGGAAGGC
TCCCTCGGCG GAACCGTGTG A
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| Protein sequence | MTNASNMSPS GSGPIVQMVD IKKHFGPVIA LNGVSFDVKA GECHCLLGDN GAGKSTFIKT
MSGVHKPTDG TILFEGREMN FASPRDSMEA GIATVYQDLA MIPLMSVTRN FWMGREPVKR
FGMIDFEKAN STTMAEMKKM GINLRSPDQA VGTLSGGERQ TVAIARAVYF GAKVLILDEP
TSALGVRQTS NVLATVDRVR RDGIGVVFIT HNVRHALAVG DRFTVLNRGK TLGTAQKGEI
TPEELQDLMA GGQEMAQLEG SLGGTV
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